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The map label for this gene is yliI [C]

Identifier: 186476381

GI number: 186476381

Start: 1844956

End: 1846218

Strand: Reverse

Name: yliI [C]

Synonym: Bphy_1623

Alternate gene names: 186476381

Gene position: 1846218-1844956 (Counterclockwise)

Preceding gene: 186476382

Following gene: 186476377

Centisome position: 53.06

GC content: 63.18

Gene sequence:

>1263_bases
ATGAACGCATTCTTGAAGCGCGTGCCGCTTGCCGTCAGCGCGGCGCTCGCGATGTTTTCCGCGGCACAGGCCGCGCAGGA
CAATGTGCAGACGTTGTCGAGCTTGAAGACGACGCGCAACAGCAAACCGGCCCAGACGGTGCCTCAGACGGGCGCGCGTG
CGGATGCGCTGCGCGAGAACCTGAGGGCGATCAAGCTGCCGCCGGGCTTCAGGATCGAACTCTACGCCGTCGTGCCGGAG
GCGCGTGCGATGGCGGTGGCGCCGTCTACTGGGGTGGTGTTCGTGGGCACGCGCGGGGATCGCGTGTGGCGGGTGACGGA
CCGAACCAGGCGGCGGGTCGCTGACGAGGTCGTGCAATTCGCGAGTTCCGTCGCGTTCAAGGTGCCCAATGCCGTGTGCT
TTTCACCGGACGGCGTGCTGTATGTCGTCGAACAGAATCGCGTGCTGGCTTTTCCTGCCGCGCAGTACCTCGGCGAGGGC
GGCCGGGACGTGGCCGCGAACGTTGTGGTGCCGCAGGGCAAGCTGATTCCGACGCAGTTCGAGAGCCTCAGTCATGGCGC
GCACTATTGCCGCGTCGGCCCCGACCAGAAGTTGTATATCGCGCTGGGTCAGCCCTGGAACGTGCCGCCCAAATACAAGC
TCGCTGAACTCGACCGCAACGGTCTGGCGGGCATCATACGCCTCGATCGGAACGGGAAGAACCGCGAAGTGTTTTCGCAC
GGCGTGCGCAATTCGGTGGGCCTCGATTTCAATCCAAAGGACAAGACGCTGTGGTTCACCGACAACCAGGTGGACGGCAT
GGGCGACGACATCCCCCCGGGCGAACTGAATCACGCAACCAGAGCGGGTGCGAACTACGGCTTCCCGTGGTATGGCGGCG
GCAAGGTGCGCACGCAGGAGTACAGGAACGAAACGCCGCCGGCGGGCGTCGTGTTTCCGGCCGTCGAGTACGCGGCGCAT
GCGGCCGATCTCGGTATGTCGTTCTATACGGGGACGATGTTTCCGCAGAAGTACCGGGGCGGTATTTTCGATGCCGAGCA
TGGCTCGTGGAATCGCACGAAGCCGATCGGCGCCCGCGTCATGTTCACAGCGGTCAAGGATGATGGCTCTGTCGGTGAGA
CAGAGGTGTTTGCTGAAGGGTGGCTCACGCCGACAGGAGAGTACACGGGACGACCCGTCGACGTTCAGCAACTGCAGGAT
GGGTCGTTGTTGGTATCCGACGATTATGCTGGTGCTGTGTATCGGATTTCTTACGCGAAATGA

Upstream 100 bases:

>100_bases
TTCTGCACGGCCGGTCAAGCGTTCGCCGCAGCCTTCACGTTCATGTTTTCGCCGTTGTTGCAGGACCAACGAACCGCATC
AGAACGCCAGGAAACATCCG

Downstream 100 bases:

>100_bases
AGCGATGAAATTTGCGACTGGCGTCGCAGACGAGAAACCAAACCAACCCAAATCCGACAGCAGGACACCCGACGATGACG
TCTGACCGACCAAGGCTTCC

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MNAFLKRVPLAVSAALAMFSAAQAAQDNVQTLSSLKTTRNSKPAQTVPQTGARADALRENLRAIKLPPGFRIELYAVVPE
ARAMAVAPSTGVVFVGTRGDRVWRVTDRTRRRVADEVVQFASSVAFKVPNAVCFSPDGVLYVVEQNRVLAFPAAQYLGEG
GRDVAANVVVPQGKLIPTQFESLSHGAHYCRVGPDQKLYIALGQPWNVPPKYKLAELDRNGLAGIIRLDRNGKNREVFSH
GVRNSVGLDFNPKDKTLWFTDNQVDGMGDDIPPGELNHATRAGANYGFPWYGGGKVRTQEYRNETPPAGVVFPAVEYAAH
AADLGMSFYTGTMFPQKYRGGIFDAEHGSWNRTKPIGARVMFTAVKDDGSVGETEVFAEGWLTPTGEYTGRPVDVQQLQD
GSLLVSDDYAGAVYRISYAK

Sequences:

>Translated_420_residues
MNAFLKRVPLAVSAALAMFSAAQAAQDNVQTLSSLKTTRNSKPAQTVPQTGARADALRENLRAIKLPPGFRIELYAVVPE
ARAMAVAPSTGVVFVGTRGDRVWRVTDRTRRRVADEVVQFASSVAFKVPNAVCFSPDGVLYVVEQNRVLAFPAAQYLGEG
GRDVAANVVVPQGKLIPTQFESLSHGAHYCRVGPDQKLYIALGQPWNVPPKYKLAELDRNGLAGIIRLDRNGKNREVFSH
GVRNSVGLDFNPKDKTLWFTDNQVDGMGDDIPPGELNHATRAGANYGFPWYGGGKVRTQEYRNETPPAGVVFPAVEYAAH
AADLGMSFYTGTMFPQKYRGGIFDAEHGSWNRTKPIGARVMFTAVKDDGSVGETEVFAEGWLTPTGEYTGRPVDVQQLQD
GSLLVSDDYAGAVYRISYAK
>Mature_420_residues
MNAFLKRVPLAVSAALAMFSAAQAAQDNVQTLSSLKTTRNSKPAQTVPQTGARADALRENLRAIKLPPGFRIELYAVVPE
ARAMAVAPSTGVVFVGTRGDRVWRVTDRTRRRVADEVVQFASSVAFKVPNAVCFSPDGVLYVVEQNRVLAFPAAQYLGEG
GRDVAANVVVPQGKLIPTQFESLSHGAHYCRVGPDQKLYIALGQPWNVPPKYKLAELDRNGLAGIIRLDRNGKNREVFSH
GVRNSVGLDFNPKDKTLWFTDNQVDGMGDDIPPGELNHATRAGANYGFPWYGGGKVRTQEYRNETPPAGVVFPAVEYAAH
AADLGMSFYTGTMFPQKYRGGIFDAEHGSWNRTKPIGARVMFTAVKDDGSVGETEVFAEGWLTPTGEYTGRPVDVQQLQD
GSLLVSDDYAGAVYRISYAK

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 45759; Mature: 45759

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFLKRVPLAVSAALAMFSAAQAAQDNVQTLSSLKTTRNSKPAQTVPQTGARADALREN
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
LRAIKLPPGFRIELYAVVPEARAMAVAPSTGVVFVGTRGDRVWRVTDRTRRRVADEVVQF
CEEEECCCCCEEEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHH
ASSVAFKVPNAVCFSPDGVLYVVEQNRVLAFPAAQYLGEGGRDVAANVVVPQGKLIPTQF
HHHHHHCCCCEEEECCCCEEEEEECCEEEEECCHHHHCCCCCEEEEEEEECCCCCCHHHH
ESLSHGAHYCRVGPDQKLYIALGQPWNVPPKYKLAELDRNGLAGIIRLDRNGKNREVFSH
HHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCCEEEEEECCCCCCHHHHHH
GVRNSVGLDFNPKDKTLWFTDNQVDGMGDDIPPGELNHATRAGANYGFPWYGGGKVRTQE
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCEEEHHH
YRNETPPAGVVFPAVEYAAHAADLGMSFYTGTMFPQKYRGGIFDAEHGSWNRTKPIGARV
HCCCCCCCCEEEHHHHHHHHHHHCCCHHHCCCCCCHHHCCCEEECCCCCCCCCCCCCCEE
MFTAVKDDGSVGETEVFAEGWLTPTGEYTGRPVDVQQLQDGSLLVSDDYAGAVYRISYAK
EEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MNAFLKRVPLAVSAALAMFSAAQAAQDNVQTLSSLKTTRNSKPAQTVPQTGARADALREN
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
LRAIKLPPGFRIELYAVVPEARAMAVAPSTGVVFVGTRGDRVWRVTDRTRRRVADEVVQF
CEEEECCCCCEEEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHH
ASSVAFKVPNAVCFSPDGVLYVVEQNRVLAFPAAQYLGEGGRDVAANVVVPQGKLIPTQF
HHHHHHCCCCEEEECCCCEEEEEECCEEEEECCHHHHCCCCCEEEEEEEECCCCCCHHHH
ESLSHGAHYCRVGPDQKLYIALGQPWNVPPKYKLAELDRNGLAGIIRLDRNGKNREVFSH
HHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCCEEEEEECCCCCCHHHHHH
GVRNSVGLDFNPKDKTLWFTDNQVDGMGDDIPPGELNHATRAGANYGFPWYGGGKVRTQE
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCCEEEHHH
YRNETPPAGVVFPAVEYAAHAADLGMSFYTGTMFPQKYRGGIFDAEHGSWNRTKPIGARV
HCCCCCCCCEEEHHHHHHHHHHHCCCHHHCCCCCCHHHCCCEEECCCCCCCCCCCCCCEE
MFTAVKDDGSVGETEVFAEGWLTPTGEYTGRPVDVQQLQDGSLLVSDDYAGAVYRISYAK
EEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]