Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is plcN [H]

Identifier: 186476304

GI number: 186476304

Start: 1746966

End: 1749080

Strand: Direct

Name: plcN [H]

Synonym: Bphy_1546

Alternate gene names: 186476304

Gene position: 1746966-1749080 (Clockwise)

Preceding gene: 186476303

Following gene: 186476308

Centisome position: 50.21

GC content: 62.08

Gene sequence:

>2115_bases
ATGACCTCAACAAACCGCCGTGATTTCTTGCGCACAGCCGCCCAGGCAGCCGGCTCTGCTACCGCATTGACGATGCTTCC
CGTGGGCATCCGCAACGCGCTCGCGATTCCCGCGAACAACAGGACGGGCAGCGTCCGCGACATCGAACATATTGTCGTGC
TGATGCAGGAAAACCGTTCGTTCGACCATTACTTCGGCACACTGAGGGGCGTGCGCGGGTTCGGCGATACGCGAGCGATC
AACCTGCCGAGCGGCAAGTCGGTGTGGCATCAGCCCGGACTGGGCGGCATCGGCGAAGTGTTGCCATTCCGTCCGACAGC
GCCGGACCTCGGCCTGCAATTCCTGGAGGATCTGCCGCACGACTGGCCGACGACGCACGGCGCATGGAACGGCGGTCGCT
ACGATCAGTGGGTGCCGAAAAAAGGCACGACGACAATGGCGTACCTCACACGCGACGACATTCCTTTCCACTACCAGCTC
GCCGACTCGTTCACAATCTGCGACGCATACCACTGCTCGCTGATGGGCGCGACCGATCCGAACCGCTACTACATGTGGAC
GGGCTGGGTCGGCAACGACGGCTCGGGCGGCGGCCCGGTCGTCGACAACTCCGAAGCGGGTTACGGCTGGTCGACGTATC
CGGAAGTGCTGGAAGCCGCGGGCATTTCATGGAAGATCTATCAGGACATCGGCACCGGTCTCGATGCAAACGGATCGTGG
GGCTGGACCAGCAATCCCTACATCGGCAATTACGGCGACAACGCGCTGCTGTACTTCAACCAGTATCGCAATGCGCAGCC
GGGCAACCCGCTGTACGACAAAGCGCGCACGGGCACGAACGTGTCGGCGGGCGACACGTACTTCGACATTCTGCGCAAGG
ACGTGCAGAGCAACCAGTTGCCGCAGGTGTCGTGGATCGTCGCGCCAGAAGCGTACTCCGAGCATCCGAACTGGCCCGCG
AATTACGGAGCGTGGTATATCGATCAGGTGTTGCAGATTCTGACGTCGAACCCCGAGGTGTGGAGCAAGACCGCGCTCCT
CATCAACTACGACGAGAACGACGGCTTCTTCGATCACATGTCGCCGCCGTTTGCGCCGTCGTCGAATGCGAACGGGCTGT
CTACCGTCGACACGACCAATGAAATCTATCCGGGCGGCAATAACGGTCAATATGGCGCCGGCCCGTATGGGCTCGGGCCG
CGTGTGCCGATGCTCGTCGTGTCCCCTTGGTCGAAGGGCGGCTGGGTATGCTCCGAGGTGTTCGATCACACGTCGGTGAT
CCGCCTTATCGAGGCGCGTTTCGGGCACGGCCACAAGCTGTCGGAGCCGAACATCACGCCGTGGCGCCGTACCGTGTGCG
GCGACCTGACGTCCGCGTTCAACTTCAAGAATCCGAACGATGCGTTCCCGACACTCCCCTCCACCGCGTCGTACAAGCCG
CAGGATCAGCAACGCCATCCCGACTACAAGCCCGTGCCGCCGCTGGTCGGTTCCGTGCCGAAACAGGAATCGGGAGTGCG
TCCGGCGCGCGCGCTGCCGTACGAGTTGTTTGTGCGCATCGACGACAACAGCAGTGGCAAAGTGTCCATGCGCTTCGTCA
ACACGGGTGACGCCGGCGCGAACTTCCTTGTGTTCGAAGCGCTCAGCGCCGATGCGCCACGCACGTACACGGTCGAAGCG
GGCAAGCGTCTCGTCGATCAACTGCCTGTCAAGGCGGACGGTTCCTACGACTTCACGGTGCATGGACCGAACGGGTTCCT
GCGTCGTTTTGCCGGCAAGCAGACTTCCGGGTACTTCTGGAACAGCCGCGACCGCGCGAGTCCAGAAGTTGCGGAAGGCT
ACGACGTGGCAAACGGCAATCTGCAACTGCGCCTGAAGAATGACGGCAACACGCGCTGTCAGTTCAAGATCGTCAATGCC
TACGACTCGGGCACGCCGCTCATCCGTTCGGTGCGCGGCGGCGATAGCGATACCGTCTATCTCGATCTGCGCAAGGTTTA
TGGCTGGTACGACCTGACCATCACCGTCGATACCGATCCGTCGTTCACGCGCCGTATTGCAGGTCACGTCGAGACGGGCA
AGCCGAGCATGAGCGATCCGGCGCTGGGCGCGTAA

Upstream 100 bases:

>100_bases
CACCCGTGATTCACACCGTCGATTGAGTTCGTCCCGCCAGCCTCCATGCCCCCGCGTGGAAGTTCACCTTACCGTTTCTT
TCCTCACGATCGAAGCCAAC

Downstream 100 bases:

>100_bases
CGCCGCCTTGTTGGAACGATGAGCAAAAGCCCGTATCGTCGTCGACGGTACGGGCTTTTCCTACGCGTCACTCCGGAAGC
AGCGACATGCTTATCCGCGC

Product: phospholipase C

Products: NA

Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]

Number of amino acids: Translated: 704; Mature: 703

Protein sequence:

>704_residues
MTSTNRRDFLRTAAQAAGSATALTMLPVGIRNALAIPANNRTGSVRDIEHIVVLMQENRSFDHYFGTLRGVRGFGDTRAI
NLPSGKSVWHQPGLGGIGEVLPFRPTAPDLGLQFLEDLPHDWPTTHGAWNGGRYDQWVPKKGTTTMAYLTRDDIPFHYQL
ADSFTICDAYHCSLMGATDPNRYYMWTGWVGNDGSGGGPVVDNSEAGYGWSTYPEVLEAAGISWKIYQDIGTGLDANGSW
GWTSNPYIGNYGDNALLYFNQYRNAQPGNPLYDKARTGTNVSAGDTYFDILRKDVQSNQLPQVSWIVAPEAYSEHPNWPA
NYGAWYIDQVLQILTSNPEVWSKTALLINYDENDGFFDHMSPPFAPSSNANGLSTVDTTNEIYPGGNNGQYGAGPYGLGP
RVPMLVVSPWSKGGWVCSEVFDHTSVIRLIEARFGHGHKLSEPNITPWRRTVCGDLTSAFNFKNPNDAFPTLPSTASYKP
QDQQRHPDYKPVPPLVGSVPKQESGVRPARALPYELFVRIDDNSSGKVSMRFVNTGDAGANFLVFEALSADAPRTYTVEA
GKRLVDQLPVKADGSYDFTVHGPNGFLRRFAGKQTSGYFWNSRDRASPEVAEGYDVANGNLQLRLKNDGNTRCQFKIVNA
YDSGTPLIRSVRGGDSDTVYLDLRKVYGWYDLTITVDTDPSFTRRIAGHVETGKPSMSDPALGA

Sequences:

>Translated_704_residues
MTSTNRRDFLRTAAQAAGSATALTMLPVGIRNALAIPANNRTGSVRDIEHIVVLMQENRSFDHYFGTLRGVRGFGDTRAI
NLPSGKSVWHQPGLGGIGEVLPFRPTAPDLGLQFLEDLPHDWPTTHGAWNGGRYDQWVPKKGTTTMAYLTRDDIPFHYQL
ADSFTICDAYHCSLMGATDPNRYYMWTGWVGNDGSGGGPVVDNSEAGYGWSTYPEVLEAAGISWKIYQDIGTGLDANGSW
GWTSNPYIGNYGDNALLYFNQYRNAQPGNPLYDKARTGTNVSAGDTYFDILRKDVQSNQLPQVSWIVAPEAYSEHPNWPA
NYGAWYIDQVLQILTSNPEVWSKTALLINYDENDGFFDHMSPPFAPSSNANGLSTVDTTNEIYPGGNNGQYGAGPYGLGP
RVPMLVVSPWSKGGWVCSEVFDHTSVIRLIEARFGHGHKLSEPNITPWRRTVCGDLTSAFNFKNPNDAFPTLPSTASYKP
QDQQRHPDYKPVPPLVGSVPKQESGVRPARALPYELFVRIDDNSSGKVSMRFVNTGDAGANFLVFEALSADAPRTYTVEA
GKRLVDQLPVKADGSYDFTVHGPNGFLRRFAGKQTSGYFWNSRDRASPEVAEGYDVANGNLQLRLKNDGNTRCQFKIVNA
YDSGTPLIRSVRGGDSDTVYLDLRKVYGWYDLTITVDTDPSFTRRIAGHVETGKPSMSDPALGA
>Mature_703_residues
TSTNRRDFLRTAAQAAGSATALTMLPVGIRNALAIPANNRTGSVRDIEHIVVLMQENRSFDHYFGTLRGVRGFGDTRAIN
LPSGKSVWHQPGLGGIGEVLPFRPTAPDLGLQFLEDLPHDWPTTHGAWNGGRYDQWVPKKGTTTMAYLTRDDIPFHYQLA
DSFTICDAYHCSLMGATDPNRYYMWTGWVGNDGSGGGPVVDNSEAGYGWSTYPEVLEAAGISWKIYQDIGTGLDANGSWG
WTSNPYIGNYGDNALLYFNQYRNAQPGNPLYDKARTGTNVSAGDTYFDILRKDVQSNQLPQVSWIVAPEAYSEHPNWPAN
YGAWYIDQVLQILTSNPEVWSKTALLINYDENDGFFDHMSPPFAPSSNANGLSTVDTTNEIYPGGNNGQYGAGPYGLGPR
VPMLVVSPWSKGGWVCSEVFDHTSVIRLIEARFGHGHKLSEPNITPWRRTVCGDLTSAFNFKNPNDAFPTLPSTASYKPQ
DQQRHPDYKPVPPLVGSVPKQESGVRPARALPYELFVRIDDNSSGKVSMRFVNTGDAGANFLVFEALSADAPRTYTVEAG
KRLVDQLPVKADGSYDFTVHGPNGFLRRFAGKQTSGYFWNSRDRASPEVAEGYDVANGNLQLRLKNDGNTRCQFKIVNAY
DSGTPLIRSVRGGDSDTVYLDLRKVYGWYDLTITVDTDPSFTRRIAGHVETGKPSMSDPALGA

Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]

COG id: COG3511

COG function: function code M; Phospholipase C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial phospholipase C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007312
- InterPro:   IPR008475
- InterPro:   IPR017767
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]

EC number: =3.1.4.3 [H]

Molecular weight: Translated: 77519; Mature: 77388

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTNRRDFLRTAAQAAGSATALTMLPVGIRNALAIPANNRTGSVRDIEHIVVLMQENRS
CCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCHHCEEEEEEEEECCCC
FDHYFGTLRGVRGFGDTRAINLPSGKSVWHQPGLGGIGEVLPFRPTAPDLGLQFLEDLPH
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCC
DWPTTHGAWNGGRYDQWVPKKGTTTMAYLTRDDIPFHYQLADSFTICDAYHCSLMGATDP
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCEEEEEEEEEEEECCCCC
NRYYMWTGWVGNDGSGGGPVVDNSEAGYGWSTYPEVLEAAGISWKIYQDIGTGLDANGSW
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHCCCCCCCCCC
GWTSNPYIGNYGDNALLYFNQYRNAQPGNPLYDKARTGTNVSAGDTYFDILRKDVQSNQL
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
PQVSWIVAPEAYSEHPNWPANYGAWYIDQVLQILTSNPEVWSKTALLINYDENDGFFDHM
CCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCC
SPPFAPSSNANGLSTVDTTNEIYPGGNNGQYGAGPYGLGPRVPMLVVSPWSKGGWVCSEV
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHH
FDHTSVIRLIEARFGHGHKLSEPNITPWRRTVCGDLTSAFNFKNPNDAFPTLPSTASYKP
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QDQQRHPDYKPVPPLVGSVPKQESGVRPARALPYELFVRIDDNSSGKVSMRFVNTGDAGA
CHHHCCCCCCCCCHHHCCCCCCCCCCCCHHCCCEEEEEEECCCCCCEEEEEEEECCCCCC
NFLVFEALSADAPRTYTVEAGKRLVDQLPVKADGSYDFTVHGPNGFLRRFAGKQTSGYFW
CEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCEE
NSRDRASPEVAEGYDVANGNLQLRLKNDGNTRCQFKIVNAYDSGTPLIRSVRGGDSDTVY
CCCCCCCCCHHCCEEECCCEEEEEEECCCCCEEEEEEEECCCCCCHHHHEECCCCCCEEE
LDLRKVYGWYDLTITVDTDPSFTRRIAGHVETGKPSMSDPALGA
EEEEECCCEEEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSTNRRDFLRTAAQAAGSATALTMLPVGIRNALAIPANNRTGSVRDIEHIVVLMQENRS
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCHHCEEEEEEEEECCCC
FDHYFGTLRGVRGFGDTRAINLPSGKSVWHQPGLGGIGEVLPFRPTAPDLGLQFLEDLPH
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCC
DWPTTHGAWNGGRYDQWVPKKGTTTMAYLTRDDIPFHYQLADSFTICDAYHCSLMGATDP
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCEEEEEEEEEEEECCCCC
NRYYMWTGWVGNDGSGGGPVVDNSEAGYGWSTYPEVLEAAGISWKIYQDIGTGLDANGSW
CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHCCCCCCCCCC
GWTSNPYIGNYGDNALLYFNQYRNAQPGNPLYDKARTGTNVSAGDTYFDILRKDVQSNQL
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCC
PQVSWIVAPEAYSEHPNWPANYGAWYIDQVLQILTSNPEVWSKTALLINYDENDGFFDHM
CCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCC
SPPFAPSSNANGLSTVDTTNEIYPGGNNGQYGAGPYGLGPRVPMLVVSPWSKGGWVCSEV
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHH
FDHTSVIRLIEARFGHGHKLSEPNITPWRRTVCGDLTSAFNFKNPNDAFPTLPSTASYKP
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
QDQQRHPDYKPVPPLVGSVPKQESGVRPARALPYELFVRIDDNSSGKVSMRFVNTGDAGA
CHHHCCCCCCCCCHHHCCCCCCCCCCCCHHCCCEEEEEEECCCCCCEEEEEEEECCCCCC
NFLVFEALSADAPRTYTVEAGKRLVDQLPVKADGSYDFTVHGPNGFLRRFAGKQTSGYFW
CEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCEE
NSRDRASPEVAEGYDVANGNLQLRLKNDGNTRCQFKIVNAYDSGTPLIRSVRGGDSDTVY
CCCCCCCCCHHCCEEECCCEEEEEEECCCCCEEEEEEEECCCCCCHHHHEECCCCCCEEE
LDLRKVYGWYDLTITVDTDPSFTRRIAGHVETGKPSMSDPALGA
EEEEECCCEEEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10523590 [H]