| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476303
Identifier: 186476303
GI number: 186476303
Start: 1746547
End: 1746891
Strand: Direct
Name: 186476303
Synonym: Bphy_1545
Alternate gene names: NA
Gene position: 1746547-1746891 (Clockwise)
Preceding gene: 186476302
Following gene: 186476304
Centisome position: 50.2
GC content: 64.93
Gene sequence:
>345_bases ATGACGATGCACGCTGTGCACGAAACTGCATGTAGGCCGCGACGCAACCGTTTGCGTTTGACATTCGCCGTCATCGCAGC GTCGGTGGCTGTGGCCGCGTGCGGAGACGACGCATCTAGCGGGGCCGGCTCGCAAGAACGTGCGCAGAATCAGGCGCGAC AGGCGCAGCACCCCACCCTTGCGACGACGTTCAATGCCGGCGCTGCGCAATCGTCGGCCACGGCCGACGCCACACTTCTG CCTCCGCAATCTTCCGCAGTTCAGCTGCGCGCCGTCTCGCCCACCGACGCCAGCGCAACGGATTCCGTCGTTCTCGCACC ACCCGTGATTCACACCGTCGATTGA
Upstream 100 bases:
>100_bases TGCTGCGCATCGCCTGGTCATGCTTTTCTCAGCTCACGCTTCACATTAGCTACACACACGCTGGCTATCCTTTCGCGTCT CTCAAGCATGACGCCGGAGG
Downstream 100 bases:
>100_bases GTTCGTCCCGCCAGCCTCCATGCCCCCGCGTGGAAGTTCACCTTACCGTTTCTTTCCTCACGATCGAAGCCAACATGACC TCAACAAACCGCCGTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MTMHAVHETACRPRRNRLRLTFAVIAASVAVAACGDDASSGAGSQERAQNQARQAQHPTLATTFNAGAAQSSATADATLL PPQSSAVQLRAVSPTDASATDSVVLAPPVIHTVD
Sequences:
>Translated_114_residues MTMHAVHETACRPRRNRLRLTFAVIAASVAVAACGDDASSGAGSQERAQNQARQAQHPTLATTFNAGAAQSSATADATLL PPQSSAVQLRAVSPTDASATDSVVLAPPVIHTVD >Mature_113_residues TMHAVHETACRPRRNRLRLTFAVIAASVAVAACGDDASSGAGSQERAQNQARQAQHPTLATTFNAGAAQSSATADATLLP PQSSAVQLRAVSPTDASATDSVVLAPPVIHTVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11660; Mature: 11529
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMHAVHETACRPRRNRLRLTFAVIAASVAVAACGDDASSGAGSQERAQNQARQAQHPTL CCCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEE ATTFNAGAAQSSATADATLLPPQSSAVQLRAVSPTDASATDSVVLAPPVIHTVD EEEECCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEECCCEEEECC >Mature Secondary Structure TMHAVHETACRPRRNRLRLTFAVIAASVAVAACGDDASSGAGSQERAQNQARQAQHPTL CCCCCHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEE ATTFNAGAAQSSATADATLLPPQSSAVQLRAVSPTDASATDSVVLAPPVIHTVD EEEECCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA