| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476253
Identifier: 186476253
GI number: 186476253
Start: 1690772
End: 1691104
Strand: Reverse
Name: 186476253
Synonym: Bphy_1495
Alternate gene names: NA
Gene position: 1691104-1690772 (Counterclockwise)
Preceding gene: 186476254
Following gene: 186476252
Centisome position: 48.61
GC content: 63.36
Gene sequence:
>333_bases ATGCAACTGCAAACGGGCAACCTGTTCAGCGGCGAAGCGAAGCGCGACGATGAAGAGCGGATCGACATGCTCGTCGCGGG GCAGCGTCTGAATGTGGAGCGGATTGTGTCGATGGGCCATACGAGCCCGCCCGGCTTCTGGTACGACGACTCGCGTGCGG AGTGGGTCGTGCTGCTGTCGGGCGCCGCCGTGCTCGAATTCGAGGAGGACGCGGCGCTGCACGACATGCGTCCCGGCGAT TATGTGCTGATCGAGCCGCACTGCCGTCATCGCGTTGCGTGGACACAGGATAACGAGCGGACCGTCTGGCTCGCGATCTA CTACGAACCTTGA
Upstream 100 bases:
>100_bases GCAATACGCGATGCATATCCATCCGACGATCAGCGAACTGGTGCCGACGTTGCTCGCCGGTCTCGCCCCGATGCAGTGAG CGATGAGCAGAGGTGACGAC
Downstream 100 bases:
>100_bases GCAGTCCCGTGCCCATCATCGACAGCCTTGCCTCCGATCGCGGATAATCGGCAGCGGCAGCGCCGGCCTGTGCCGGCGTG GATGAACAACGATAACGGCA
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Phosphoribosylaminoimidazole Carboxylase ATPase Subunit; Cupin Family Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Mannose-6-Phosphate Isomerase; Cupin 2 Barrel-Containing Protein; Lipid A 3-O-Deacylase
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLSGAAVLEFEEDAALHDMRPGD YVLIEPHCRHRVAWTQDNERTVWLAIYYEP
Sequences:
>Translated_110_residues MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLSGAAVLEFEEDAALHDMRPGD YVLIEPHCRHRVAWTQDNERTVWLAIYYEP >Mature_110_residues MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLSGAAVLEFEEDAALHDMRPGD YVLIEPHCRHRVAWTQDNERTVWLAIYYEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12719; Mature: 12719
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLS CCCCCCCEECCCCCCCCHHHEEEEEECCCCCHHHHHHCCCCCCCCCEEECCCCCEEEEEE GAAVLEFEEDAALHDMRPGDYVLIEPHCRHRVAWTQDNERTVWLAIYYEP CCEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEEECC >Mature Secondary Structure MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLS CCCCCCCEECCCCCCCCHHHEEEEEECCCCCHHHHHHCCCCCCCCCEEECCCCCEEEEEE GAAVLEFEEDAALHDMRPGDYVLIEPHCRHRVAWTQDNERTVWLAIYYEP CCEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA