Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476253

Identifier: 186476253

GI number: 186476253

Start: 1690772

End: 1691104

Strand: Reverse

Name: 186476253

Synonym: Bphy_1495

Alternate gene names: NA

Gene position: 1691104-1690772 (Counterclockwise)

Preceding gene: 186476254

Following gene: 186476252

Centisome position: 48.61

GC content: 63.36

Gene sequence:

>333_bases
ATGCAACTGCAAACGGGCAACCTGTTCAGCGGCGAAGCGAAGCGCGACGATGAAGAGCGGATCGACATGCTCGTCGCGGG
GCAGCGTCTGAATGTGGAGCGGATTGTGTCGATGGGCCATACGAGCCCGCCCGGCTTCTGGTACGACGACTCGCGTGCGG
AGTGGGTCGTGCTGCTGTCGGGCGCCGCCGTGCTCGAATTCGAGGAGGACGCGGCGCTGCACGACATGCGTCCCGGCGAT
TATGTGCTGATCGAGCCGCACTGCCGTCATCGCGTTGCGTGGACACAGGATAACGAGCGGACCGTCTGGCTCGCGATCTA
CTACGAACCTTGA

Upstream 100 bases:

>100_bases
GCAATACGCGATGCATATCCATCCGACGATCAGCGAACTGGTGCCGACGTTGCTCGCCGGTCTCGCCCCGATGCAGTGAG
CGATGAGCAGAGGTGACGAC

Downstream 100 bases:

>100_bases
GCAGTCCCGTGCCCATCATCGACAGCCTTGCCTCCGATCGCGGATAATCGGCAGCGGCAGCGCCGGCCTGTGCCGGCGTG
GATGAACAACGATAACGGCA

Product: cupin 2 domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Phosphoribosylaminoimidazole Carboxylase ATPase Subunit; Cupin Family Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; Mannose-6-Phosphate Isomerase; Cupin 2 Barrel-Containing Protein; Lipid A 3-O-Deacylase

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLSGAAVLEFEEDAALHDMRPGD
YVLIEPHCRHRVAWTQDNERTVWLAIYYEP

Sequences:

>Translated_110_residues
MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLSGAAVLEFEEDAALHDMRPGD
YVLIEPHCRHRVAWTQDNERTVWLAIYYEP
>Mature_110_residues
MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLSGAAVLEFEEDAALHDMRPGD
YVLIEPHCRHRVAWTQDNERTVWLAIYYEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12719; Mature: 12719

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLS
CCCCCCCEECCCCCCCCHHHEEEEEECCCCCHHHHHHCCCCCCCCCEEECCCCCEEEEEE
GAAVLEFEEDAALHDMRPGDYVLIEPHCRHRVAWTQDNERTVWLAIYYEP
CCEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MQLQTGNLFSGEAKRDDEERIDMLVAGQRLNVERIVSMGHTSPPGFWYDDSRAEWVVLLS
CCCCCCCEECCCCCCCCHHHEEEEEECCCCCHHHHHHCCCCCCCCCEEECCCCCEEEEEE
GAAVLEFEEDAALHDMRPGDYVLIEPHCRHRVAWTQDNERTVWLAIYYEP
CCEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA