| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476251
Identifier: 186476251
GI number: 186476251
Start: 1689289
End: 1690077
Strand: Reverse
Name: 186476251
Synonym: Bphy_1493
Alternate gene names: NA
Gene position: 1690077-1689289 (Counterclockwise)
Preceding gene: 186476252
Following gene: 186476250
Centisome position: 48.58
GC content: 70.85
Gene sequence:
>789_bases ATGCTTGCGCTCAAGCTCGCGCTGGTTCCCGGCTTTCTCGCTGCGCTGACCTTGGCGGGACGCGTGTGGGGCCCGTCGGT GGCAGGCTGGCTGGCGGGATTGCCCGTCGTCGCCGGGCCGATCGTGCTGCTGCTCGCACTGGAGCGCGGAACCGCGTTTG CGGTGCATGTGTCGGTGGCGTCGATTGCGGCCATCGCCGCGTCGGAAGCGTTCAACTTCGCGTACGCGTGGACATGCCGC GCGAACTGCTGGTGGGTCGCGCTGCTCGTGGGACTGGTCGCGTGGGCGGTGGTCGCCGTGTTGCTCACGCATCTGCCGCT GAGCCTCGCATGGTCGGGTGCGGTGGCGTGCGTGGCCGTCGCCGTCTCGCAAGCCGGCTTGCCGCGCGTCGAAGGCGTGA TGCCCGCCGCGCGCGTGCCGTTCGCCGATCTTGCGTTGCGCATGCTCGCGGGGACGTTGCTGACGCTCGCGGTGACGACG TTGTCCGCGTCGATGGGCCCAGCGTGGAGCGGCGTGCTGTCCGTGTTTCCGCTGCTCGGCAGCGTGCTCGCCGTCTCGGC GCAGCGCGCGCACGGTGCGCCTTTTGTCGCGTTGCTGATGCGCGGCATGGTGATCGGGCGCGCGTCGTTTGCGGCGTTCT TCCTGGTCGCCGCGTCGACGCTGCCGACGCTCGGCGTACTGCCCGCTTTCGCGTGCGGCGCGGTCGTGTCCGTGCTCGTG CAGGGTGCGACGAAGCGGCTGGTCGAGATGTCGCACAAGCCGCGCGCGCCGCTCGCCGCGCTCGATTGA
Upstream 100 bases:
>100_bases GTTCATCGCGCCGTGGGTCTCGGTCATGCTCTATACGCTGTGCGCGTTTATGTGGCTCGTACCGGACCGCCGCATCGAAG TGCTCGTCAAGGAATAGCCG
Downstream 100 bases:
>100_bases ATTTCTGGAACACACGATGGTCAAGCGGCGCACACAGCCATCCCGCATCGGTTTGATTTCGGACACGCATAATCTCGTGC GGCCGGAAGCGCTCGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MLALKLALVPGFLAALTLAGRVWGPSVAGWLAGLPVVAGPIVLLLALERGTAFAVHVSVASIAAIAASEAFNFAYAWTCR ANCWWVALLVGLVAWAVVAVLLTHLPLSLAWSGAVACVAVAVSQAGLPRVEGVMPAARVPFADLALRMLAGTLLTLAVTT LSASMGPAWSGVLSVFPLLGSVLAVSAQRAHGAPFVALLMRGMVIGRASFAAFFLVAASTLPTLGVLPAFACGAVVSVLV QGATKRLVEMSHKPRAPLAALD
Sequences:
>Translated_262_residues MLALKLALVPGFLAALTLAGRVWGPSVAGWLAGLPVVAGPIVLLLALERGTAFAVHVSVASIAAIAASEAFNFAYAWTCR ANCWWVALLVGLVAWAVVAVLLTHLPLSLAWSGAVACVAVAVSQAGLPRVEGVMPAARVPFADLALRMLAGTLLTLAVTT LSASMGPAWSGVLSVFPLLGSVLAVSAQRAHGAPFVALLMRGMVIGRASFAAFFLVAASTLPTLGVLPAFACGAVVSVLV QGATKRLVEMSHKPRAPLAALD >Mature_262_residues MLALKLALVPGFLAALTLAGRVWGPSVAGWLAGLPVVAGPIVLLLALERGTAFAVHVSVASIAAIAASEAFNFAYAWTCR ANCWWVALLVGLVAWAVVAVLLTHLPLSLAWSGAVACVAVAVSQAGLPRVEGVMPAARVPFADLALRMLAGTLLTLAVTT LSASMGPAWSGVLSVFPLLGSVLAVSAQRAHGAPFVALLMRGMVIGRASFAAFFLVAASTLPTLGVLPAFACGAVVSVLV QGATKRLVEMSHKPRAPLAALD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26675; Mature: 26675
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALKLALVPGFLAALTLAGRVWGPSVAGWLAGLPVVAGPIVLLLALERGTAFAVHVSVA CCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEHHHH SIAAIAASEAFNFAYAWTCRANCWWVALLVGLVAWAVVAVLLTHLPLSLAWSGAVACVAV HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AVSQAGLPRVEGVMPAARVPFADLALRMLAGTLLTLAVTTLSASMGPAWSGVLSVFPLLG HHHHCCCCHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SVLAVSAQRAHGAPFVALLMRGMVIGRASFAAFFLVAASTLPTLGVLPAFACGAVVSVLV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH QGATKRLVEMSHKPRAPLAALD HHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLALKLALVPGFLAALTLAGRVWGPSVAGWLAGLPVVAGPIVLLLALERGTAFAVHVSVA CCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEHHHH SIAAIAASEAFNFAYAWTCRANCWWVALLVGLVAWAVVAVLLTHLPLSLAWSGAVACVAV HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH AVSQAGLPRVEGVMPAARVPFADLALRMLAGTLLTLAVTTLSASMGPAWSGVLSVFPLLG HHHHCCCCHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SVLAVSAQRAHGAPFVALLMRGMVIGRASFAAFFLVAASTLPTLGVLPAFACGAVVSVLV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH QGATKRLVEMSHKPRAPLAALD HHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA