| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476250
Identifier: 186476250
GI number: 186476250
Start: 1688790
End: 1689272
Strand: Reverse
Name: 186476250
Synonym: Bphy_1492
Alternate gene names: NA
Gene position: 1689272-1688790 (Counterclockwise)
Preceding gene: 186476251
Following gene: 186476246
Centisome position: 48.55
GC content: 63.35
Gene sequence:
>483_bases ATGGTCAAGCGGCGCACACAGCCATCCCGCATCGGTTTGATTTCGGACACGCATAATCTCGTGCGGCCGGAAGCGCTCGC ATGGCTCGCGCGTTGCGACGCGATCATCCACGCGGGCGACATCTGCAATCGGGCGGTGCTCGATGCGCTTGAACCGATCG CGCCGCTGACTGTCGTGTGCGGCAACAACGACATGGGCGACTGGGCCGCGTCCATTCCGCTGCACGCGACGCTCGACGTG CAGCAGGTCAGGATATTTGTCGTTCACGATATCGCCGATGTGCCGCGCGATCTGCACGACGCAGGCGTGCGCGTGGTCGT GACGGGACATTCGCACAAGCCGCTGATCGTCGAGCGCGACGGAGTGCTATTCGTCAATCCCGGCAGCGCGGGACCGCGCC GTTTCAAGCTGCCGGTTTCGGTGGGCATGTTGACGATCGACGGTGCAAGCGTCGAAGCCACGTTGCATACGCTGACGCCA TAA
Upstream 100 bases:
>100_bases GTGTCCGTGCTCGTGCAGGGTGCGACGAAGCGGCTGGTCGAGATGTCGCACAAGCCGCGCGCGCCGCTCGCCGCGCTCGA TTGAATTTCTGGAACACACG
Downstream 100 bases:
>100_bases AAAACGGATCAGCCGAAGCTGACCCGTTTCAGTCCTGTGCGAGACGTGTGGCTCGCTTATGCACGCACCGTTGCGGTAGC CGCATACGCTTCTTCGATTT
Product: phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MVKRRTQPSRIGLISDTHNLVRPEALAWLARCDAIIHAGDICNRAVLDALEPIAPLTVVCGNNDMGDWAASIPLHATLDV QQVRIFVVHDIADVPRDLHDAGVRVVVTGHSHKPLIVERDGVLFVNPGSAGPRRFKLPVSVGMLTIDGASVEATLHTLTP
Sequences:
>Translated_160_residues MVKRRTQPSRIGLISDTHNLVRPEALAWLARCDAIIHAGDICNRAVLDALEPIAPLTVVCGNNDMGDWAASIPLHATLDV QQVRIFVVHDIADVPRDLHDAGVRVVVTGHSHKPLIVERDGVLFVNPGSAGPRRFKLPVSVGMLTIDGASVEATLHTLTP >Mature_160_residues MVKRRTQPSRIGLISDTHNLVRPEALAWLARCDAIIHAGDICNRAVLDALEPIAPLTVVCGNNDMGDWAASIPLHATLDV QQVRIFVVHDIADVPRDLHDAGVRVVVTGHSHKPLIVERDGVLFVNPGSAGPRRFKLPVSVGMLTIDGASVEATLHTLTP
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 17249; Mature: 17249
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRRTQPSRIGLISDTHNLVRPEALAWLARCDAIIHAGDICNRAVLDALEPIAPLTVVC CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCEEEEE GNNDMGDWAASIPLHATLDVQQVRIFVVHDIADVPRDLHDAGVRVVVTGHSHKPLIVERD CCCCCCCEEECCCEEEEECHHHEEEEEEECHHHCCCCHHHCCEEEEEECCCCCCEEEECC GVLFVNPGSAGPRRFKLPVSVGMLTIDGASVEATLHTLTP CEEEECCCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCC >Mature Secondary Structure MVKRRTQPSRIGLISDTHNLVRPEALAWLARCDAIIHAGDICNRAVLDALEPIAPLTVVC CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHCCCCCEEEEE GNNDMGDWAASIPLHATLDVQQVRIFVVHDIADVPRDLHDAGVRVVVTGHSHKPLIVERD CCCCCCCEEECCCEEEEECHHHEEEEEEECHHHCCCCHHHCCEEEEEECCCCCCEEEECC GVLFVNPGSAGPRRFKLPVSVGMLTIDGASVEATLHTLTP CEEEECCCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]