| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is aceE [H]
Identifier: 186476228
GI number: 186476228
Start: 1653718
End: 1656417
Strand: Reverse
Name: aceE [H]
Synonym: Bphy_1470
Alternate gene names: 186476228
Gene position: 1656417-1653718 (Counterclockwise)
Preceding gene: 186476235
Following gene: 186476227
Centisome position: 47.61
GC content: 62.56
Gene sequence:
>2700_bases ATGTCCGCTGTACCTGACGAAGTGATGAAGTACGTCGCCAACGCCAAAGACGATAGCGACCCGCAAGAAACGGCCGAGTG GCTCGAAGCGCTTGATGGCGTGATTTCTGCTGTCGGACCCGACCGCGCTCACTACCTCATCGAAAAGCAGATCGAATTTG CACGCGTGCATGGCGAGCATCTGCCTTTCTCTGCGAACACCCCGTACATCAATACGATCCCCGTCGCGAATCAGGCGAAG ATTCCGGGCGACCAGGACGTCGAACACCGCATCCGCTCGTACACGCGCTGGAACGCGATGGCGATGGTGCTGCGCGCTGG CAAGGACACCAACGTCGGCGGCCACATCGCATCGTTCGCCTCGGCCGCGACGCTGTACGACGTCGGCTTCAACCACTTCT GGCACGCGCCGTCGAAAGATCACGGCGGCGACCTCGTGTTCGTGCAGGGCCACTCGTCGCCGGGCGTCTACTCGCGCGCG TTCCTGCTCGGCCGACTGTCGGAGAACCAGCTCGACAACTTCCGTCAGGAAGTGGGCGGCGAGGGCATCTCGTCGTACCC GCATCCCTGGCTGATGCCGGACTTCTGGCAGTTCCCGACGGTGTCGATGGGTCTCGGCCCGATCATGGCGATCTATCAGG CCCGCTTCATGAAGTACCTGCAGGCGCGCGGCATCGCGAAGACCGACGGCCGCAAAGTGTGGGCGTTCCTCGGCGACGGC GAAACGGATGAACCGGAATCGCTCGGTGCAATCGGCATGGCCGGCCGCGAGCGTCTCGACAACCTCGTGTTCGTCATCAA CTGCAACCTGCAGCGCCTCGACGGCCCGGTGCGCGGCAACGGCAAAATCATTCAGGAACTCGAAAGCGAGTTCCGCGGCG CCGGCTGGAACGTCATCAAGGTGGTCTGGGGCAGCCGCTGGGATGCCCTGTTCGCACGCGACAAGTCGGGCGCACTGATG CGCCGGATGATGGAAGTCGTCGACGGCGAATATCAGACGTACAAGTCCGAGTCGGGCGCGTTCGTTCGCGAGCACTTCTT CAACACGCCCGAACTGAAGGCGCTGGTTGCCGACTGGTCCGATGACGATGTGTGGAGCCTGAACCGCGGCGGCCACGATC CGCACAAGATCTACGCGGCGTTCAAGCAGGCGACGCAGGCGCAGGGCCAGCCGACTGTGATACTCGCGAAGACGATCAAG GGCTACGGCATGGGCGAAGCCGGCCAGGCGATGAACATCACCCACCAGCAGAAGAAGATGCAGGTGGAAGCGCTCAAGCA TTTCCGCGACCAGTTCCGCCTGCCCATTTCGGACGACGAGATTGCGCACGTGCCGTATCTGAAGTTCGAGGAAGGCTCGA AGGAACTTGAATACATGCGCGCCCGCCGCCAGGAACTGGGCGGCTATCTGCCGGCGCGCCGCCAGAAGGCGGAATCGCTG CCCGTTCCGGGGCTCGACGCATTCGAGCCGCTGCTGAAGGGCACGGGCGAAGGCCGCGAAATTTCCACGACGATGGCGTT CGTGCGGATTCTCAACATCGTGTTGAAGGACAAGGCAATCGGCAAGCGCGTCGTGCCCATCGTGCCGGACGAGTCGCGTA CCTTCGGCATGGAAGGTCTGTTCCGCCAGATCGGCATCTGGAATCAGGACGGCCAGAAGTACATCCCGGAAGATTCCGAC CAGCTGATGTTCTACCGTGAGTCGGAAACGGGCCAGATCCTGCAGGAAGGCATCAACGAAGCAGGCGGCATGTCGGACTG GATCGCAGCGGCGACGTCGTATTCGACGCACGGCGAGATCATGATCCCGTTCTACATCTTCTACTCGATGTTCGGCATGC AGCGCATCGGCGACCTGGTGTGGGCCGCAGGCGACATGCGTTCGCGCGGCTTCCTGTTGGGCGGCACGGCGGGCCGGACG ACGCTCAACGGCGAAGGCCTGCAGCACGAAGACGGCCACTCGCTGCTGTGGGCTGCATCGGTGCCGAACTGCCTGAGCTA TGACCCGACGTTTGGCTACGAACTCGCTGTCATCATGCAGGACGGTCTGCGCCGCATGGTGCAGGAACAGGAAGACGTGT TCTATTACATCACGGTGATGAATGAGAACTACGAGCACCCGGCGATCCCGCAGGGCGAGCACGTGGCGAAGGACATCATC AAGGGGATGTACGCGTTCCGCAAGGGCGCCGACAACGCGAAGGCGCCGCGCGTGCAGCTGATGGGCGCGGGCACGATCTT CAACGAAGTGATCGCCGCCGCCGACCTGCTGAAGAACGACTGGGGCGTCGAAGCCGACCTGTGGAGCGTGCCGAGCTTCA CGGAACTGGCGCGCGAAGGTCACGAAGTGCAGCGTCAAAACCTGCTGAACCCGCTCGCCGAAAAGAAGCTCTCGCATGTC GAGACGCTGCTGAAGGACGCAAAGGGTCCTGTGATCGCGTCGACCGACTACGTCCGAGCGCTGGTCGACCAGATCCGTGC GTTTGTCCCGCAACGCTTCGTCGTGCTGGGCACCGACGGTTTCGGCCGCTCGGACACGCGCGAAAAGCTGCGTCACTTCT TTGAAGTCGACCGCTACTGGACGACGGTTGCTGCGCTGAATGCGCTGGCCGATGAGGGTACGATTGAGCGCAAGGTGGTG GCCGACGCGCTGAAGAAGTACAACCTCGATCCGTCCAAACCCAACCCGATGACCGTCTAA
Upstream 100 bases:
>100_bases CAGGCGTTGTGGGCCTTATTACAATCGCCCGGAAGCTGCCGCGGTCGCCGTTCGTCCGCGTCGCCTGTTCACAGAGCGTT CCCATATCCAGGAGACGAGC
Downstream 100 bases:
>100_bases GGCATCGACCCGCGAGCCCCAATGTGTACCTCGCCGCCCGAAGCGGGCGGCGAGGTGCGCGCGGCCCTGGAGACAGAAAA CAATGAGCCAAGCGATCGAA
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 899; Mature: 898
Protein sequence:
>899_residues MSAVPDEVMKYVANAKDDSDPQETAEWLEALDGVISAVGPDRAHYLIEKQIEFARVHGEHLPFSANTPYINTIPVANQAK IPGDQDVEHRIRSYTRWNAMAMVLRAGKDTNVGGHIASFASAATLYDVGFNHFWHAPSKDHGGDLVFVQGHSSPGVYSRA FLLGRLSENQLDNFRQEVGGEGISSYPHPWLMPDFWQFPTVSMGLGPIMAIYQARFMKYLQARGIAKTDGRKVWAFLGDG ETDEPESLGAIGMAGRERLDNLVFVINCNLQRLDGPVRGNGKIIQELESEFRGAGWNVIKVVWGSRWDALFARDKSGALM RRMMEVVDGEYQTYKSESGAFVREHFFNTPELKALVADWSDDDVWSLNRGGHDPHKIYAAFKQATQAQGQPTVILAKTIK GYGMGEAGQAMNITHQQKKMQVEALKHFRDQFRLPISDDEIAHVPYLKFEEGSKELEYMRARRQELGGYLPARRQKAESL PVPGLDAFEPLLKGTGEGREISTTMAFVRILNIVLKDKAIGKRVVPIVPDESRTFGMEGLFRQIGIWNQDGQKYIPEDSD QLMFYRESETGQILQEGINEAGGMSDWIAAATSYSTHGEIMIPFYIFYSMFGMQRIGDLVWAAGDMRSRGFLLGGTAGRT TLNGEGLQHEDGHSLLWAASVPNCLSYDPTFGYELAVIMQDGLRRMVQEQEDVFYYITVMNENYEHPAIPQGEHVAKDII KGMYAFRKGADNAKAPRVQLMGAGTIFNEVIAAADLLKNDWGVEADLWSVPSFTELAREGHEVQRQNLLNPLAEKKLSHV ETLLKDAKGPVIASTDYVRALVDQIRAFVPQRFVVLGTDGFGRSDTREKLRHFFEVDRYWTTVAALNALADEGTIERKVV ADALKKYNLDPSKPNPMTV
Sequences:
>Translated_899_residues MSAVPDEVMKYVANAKDDSDPQETAEWLEALDGVISAVGPDRAHYLIEKQIEFARVHGEHLPFSANTPYINTIPVANQAK IPGDQDVEHRIRSYTRWNAMAMVLRAGKDTNVGGHIASFASAATLYDVGFNHFWHAPSKDHGGDLVFVQGHSSPGVYSRA FLLGRLSENQLDNFRQEVGGEGISSYPHPWLMPDFWQFPTVSMGLGPIMAIYQARFMKYLQARGIAKTDGRKVWAFLGDG ETDEPESLGAIGMAGRERLDNLVFVINCNLQRLDGPVRGNGKIIQELESEFRGAGWNVIKVVWGSRWDALFARDKSGALM RRMMEVVDGEYQTYKSESGAFVREHFFNTPELKALVADWSDDDVWSLNRGGHDPHKIYAAFKQATQAQGQPTVILAKTIK GYGMGEAGQAMNITHQQKKMQVEALKHFRDQFRLPISDDEIAHVPYLKFEEGSKELEYMRARRQELGGYLPARRQKAESL PVPGLDAFEPLLKGTGEGREISTTMAFVRILNIVLKDKAIGKRVVPIVPDESRTFGMEGLFRQIGIWNQDGQKYIPEDSD QLMFYRESETGQILQEGINEAGGMSDWIAAATSYSTHGEIMIPFYIFYSMFGMQRIGDLVWAAGDMRSRGFLLGGTAGRT TLNGEGLQHEDGHSLLWAASVPNCLSYDPTFGYELAVIMQDGLRRMVQEQEDVFYYITVMNENYEHPAIPQGEHVAKDII KGMYAFRKGADNAKAPRVQLMGAGTIFNEVIAAADLLKNDWGVEADLWSVPSFTELAREGHEVQRQNLLNPLAEKKLSHV ETLLKDAKGPVIASTDYVRALVDQIRAFVPQRFVVLGTDGFGRSDTREKLRHFFEVDRYWTTVAALNALADEGTIERKVV ADALKKYNLDPSKPNPMTV >Mature_898_residues SAVPDEVMKYVANAKDDSDPQETAEWLEALDGVISAVGPDRAHYLIEKQIEFARVHGEHLPFSANTPYINTIPVANQAKI PGDQDVEHRIRSYTRWNAMAMVLRAGKDTNVGGHIASFASAATLYDVGFNHFWHAPSKDHGGDLVFVQGHSSPGVYSRAF LLGRLSENQLDNFRQEVGGEGISSYPHPWLMPDFWQFPTVSMGLGPIMAIYQARFMKYLQARGIAKTDGRKVWAFLGDGE TDEPESLGAIGMAGRERLDNLVFVINCNLQRLDGPVRGNGKIIQELESEFRGAGWNVIKVVWGSRWDALFARDKSGALMR RMMEVVDGEYQTYKSESGAFVREHFFNTPELKALVADWSDDDVWSLNRGGHDPHKIYAAFKQATQAQGQPTVILAKTIKG YGMGEAGQAMNITHQQKKMQVEALKHFRDQFRLPISDDEIAHVPYLKFEEGSKELEYMRARRQELGGYLPARRQKAESLP VPGLDAFEPLLKGTGEGREISTTMAFVRILNIVLKDKAIGKRVVPIVPDESRTFGMEGLFRQIGIWNQDGQKYIPEDSDQ LMFYRESETGQILQEGINEAGGMSDWIAAATSYSTHGEIMIPFYIFYSMFGMQRIGDLVWAAGDMRSRGFLLGGTAGRTT LNGEGLQHEDGHSLLWAASVPNCLSYDPTFGYELAVIMQDGLRRMVQEQEDVFYYITVMNENYEHPAIPQGEHVAKDIIK GMYAFRKGADNAKAPRVQLMGAGTIFNEVIAAADLLKNDWGVEADLWSVPSFTELAREGHEVQRQNLLNPLAEKKLSHVE TLLKDAKGPVIASTDYVRALVDQIRAFVPQRFVVLGTDGFGRSDTREKLRHFFEVDRYWTTVAALNALADEGTIERKVVA DALKKYNLDPSKPNPMTV
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=886, Percent_Identity=59.0293453724605, Blast_Score=1074, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 100610; Mature: 100479
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVPDEVMKYVANAKDDSDPQETAEWLEALDGVISAVGPDRAHYLIEKQIEFARVHGEH CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC LPFSANTPYINTIPVANQAKIPGDQDVEHRIRSYTRWNAMAMVLRAGKDTNVGGHIASFA CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH SAATLYDVGFNHFWHAPSKDHGGDLVFVQGHSSPGVYSRAFLLGRLSENQLDNFRQEVGG HHHHHHHCCHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC EGISSYPHPWLMPDFWQFPTVSMGLGPIMAIYQARFMKYLQARGIAKTDGRKVWAFLGDG CCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC ETDEPESLGAIGMAGRERLDNLVFVINCNLQRLDGPVRGNGKIIQELESEFRGAGWNVIK CCCCCHHCCHHCHHHHHHHCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEE VVWGSRWDALFARDKSGALMRRMMEVVDGEYQTYKSESGAFVREHFFNTPELKALVADWS EEECCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHCCCCCHHHHHEECCC DDDVWSLNRGGHDPHKIYAAFKQATQAQGQPTVILAKTIKGYGMGEAGQAMNITHQQKKM CCCCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH QVEALKHFRDQFRLPISDDEIAHVPYLKFEEGSKELEYMRARRQELGGYLPARRQKAESL HHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC PVPGLDAFEPLLKGTGEGREISTTMAFVRILNIVLKDKAIGKRVVPIVPDESRTFGMEGL CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH FRQIGIWNQDGQKYIPEDSDQLMFYRESETGQILQEGINEAGGMSDWIAAATSYSTHGEI HHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCE MIPFYIFYSMFGMQRIGDLVWAAGDMRSRGFLLGGTAGRTTLNGEGLQHEDGHSLLWAAS EHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCEEEECC VPNCLSYDPTFGYELAVIMQDGLRRMVQEQEDVFYYITVMNENYEHPAIPQGEHVAKDII CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH KGMYAFRKGADNAKAPRVQLMGAGTIFNEVIAAADLLKNDWGVEADLWSVPSFTELAREG HHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH HEVQRQNLLNPLAEKKLSHVETLLKDAKGPVIASTDYVRALVDQIRAFVPQRFVVLGTDG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCCEEEEECCC FGRSDTREKLRHFFEVDRYWTTVAALNALADEGTIERKVVADALKKYNLDPSKPNPMTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SAVPDEVMKYVANAKDDSDPQETAEWLEALDGVISAVGPDRAHYLIEKQIEFARVHGEH CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC LPFSANTPYINTIPVANQAKIPGDQDVEHRIRSYTRWNAMAMVLRAGKDTNVGGHIASFA CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH SAATLYDVGFNHFWHAPSKDHGGDLVFVQGHSSPGVYSRAFLLGRLSENQLDNFRQEVGG HHHHHHHCCHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC EGISSYPHPWLMPDFWQFPTVSMGLGPIMAIYQARFMKYLQARGIAKTDGRKVWAFLGDG CCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC ETDEPESLGAIGMAGRERLDNLVFVINCNLQRLDGPVRGNGKIIQELESEFRGAGWNVIK CCCCCHHCCHHCHHHHHHHCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEE VVWGSRWDALFARDKSGALMRRMMEVVDGEYQTYKSESGAFVREHFFNTPELKALVADWS EEECCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHCCCCCHHHHHEECCC DDDVWSLNRGGHDPHKIYAAFKQATQAQGQPTVILAKTIKGYGMGEAGQAMNITHQQKKM CCCCEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH QVEALKHFRDQFRLPISDDEIAHVPYLKFEEGSKELEYMRARRQELGGYLPARRQKAESL HHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCC PVPGLDAFEPLLKGTGEGREISTTMAFVRILNIVLKDKAIGKRVVPIVPDESRTFGMEGL CCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH FRQIGIWNQDGQKYIPEDSDQLMFYRESETGQILQEGINEAGGMSDWIAAATSYSTHGEI HHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCE MIPFYIFYSMFGMQRIGDLVWAAGDMRSRGFLLGGTAGRTTLNGEGLQHEDGHSLLWAAS EHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEECCCCCCCCCCCCEEEECC VPNCLSYDPTFGYELAVIMQDGLRRMVQEQEDVFYYITVMNENYEHPAIPQGEHVAKDII CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHH KGMYAFRKGADNAKAPRVQLMGAGTIFNEVIAAADLLKNDWGVEADLWSVPSFTELAREG HHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH HEVQRQNLLNPLAEKKLSHVETLLKDAKGPVIASTDYVRALVDQIRAFVPQRFVVLGTDG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCCEEEEECCC FGRSDTREKLRHFFEVDRYWTTVAALNALADEGTIERKVVADALKKYNLDPSKPNPMTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8021225 [H]