Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476220

Identifier: 186476220

GI number: 186476220

Start: 1642910

End: 1643398

Strand: Direct

Name: 186476220

Synonym: Bphy_1462

Alternate gene names: NA

Gene position: 1642910-1643398 (Clockwise)

Preceding gene: 186476209

Following gene: 186476223

Centisome position: 47.22

GC content: 69.12

Gene sequence:

>489_bases
ATGAAACGTCTTATTCCTACTCTTGCTCCTGCTGTCGTTGCCGTCTGCGCGGTTGCCGCGCTCGGCGGATGTGTCGCCTA
TCCCGCCGGACAGCCAGCCTATGGCTACTACGACGGCTACTATGACGGCTACGGCGCGCCTGCCTACGGTTACGCCGAGC
CTCCCGTTCAATCCAGCTTGTTCCTCGGTTTCGGCGGCTATTCGGGGCGCGACTATGACCGCGGCTATTGGGGCGGCCGT
GGGTACGACCACGGATACAACCACGACCACGGCAACTGGAACGGCCACAGCGGCGGCAATGGCGGGCCGCCCCGCGGTCA
GCCGCCGCAGGCGGGCGGTCCGCCGATGAGTCCCGGCGGCAACTCGGGCGGCATGCATGGCATCCGGCCGCCCGTGCAGG
CGGGCGCGGGGCAACAGCAGGGCGGCGGCAATCGCGGCGGCAGTCGGGGCGGCGAAGCCTGGAACGAAGGCGGCGGCCGC
CCGCATTAA

Upstream 100 bases:

>100_bases
TCCCGAAAGAAATCCTTACAAAAGCACACACAGGTAATGCTCAGTCGGCGCTACAAATAGAACTGCGGACATCGCGTCTC
TCGCTTGTCTTAACACTCAA

Downstream 100 bases:

>100_bases
AAGGGGGACGGGGCAACCCGTCAGGCTGTCGGCGGCGATCCGGAAGACAAAGAGGCTGCATCGGGCGAGCGATGCAGCCT
CTTTCAATAGCAGCGACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKRLIPTLAPAVVAVCAVAALGGCVAYPAGQPAYGYYDGYYDGYGAPAYGYAEPPVQSSLFLGFGGYSGRDYDRGYWGGR
GYDHGYNHDHGNWNGHSGGNGGPPRGQPPQAGGPPMSPGGNSGGMHGIRPPVQAGAGQQQGGGNRGGSRGGEAWNEGGGR
PH

Sequences:

>Translated_162_residues
MKRLIPTLAPAVVAVCAVAALGGCVAYPAGQPAYGYYDGYYDGYGAPAYGYAEPPVQSSLFLGFGGYSGRDYDRGYWGGR
GYDHGYNHDHGNWNGHSGGNGGPPRGQPPQAGGPPMSPGGNSGGMHGIRPPVQAGAGQQQGGGNRGGSRGGEAWNEGGGR
PH
>Mature_162_residues
MKRLIPTLAPAVVAVCAVAALGGCVAYPAGQPAYGYYDGYYDGYGAPAYGYAEPPVQSSLFLGFGGYSGRDYDRGYWGGR
GYDHGYNHDHGNWNGHSGGNGGPPRGQPPQAGGPPMSPGGNSGGMHGIRPPVQAGAGQQQGGGNRGGSRGGEAWNEGGGR
PH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16452; Mature: 16452

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIPTLAPAVVAVCAVAALGGCVAYPAGQPAYGYYDGYYDGYGAPAYGYAEPPVQSSL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEE
FLGFGGYSGRDYDRGYWGGRGYDHGYNHDHGNWNGHSGGNGGPPRGQPPQAGGPPMSPGG
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NSGGMHGIRPPVQAGAGQQQGGGNRGGSRGGEAWNEGGGRPH
CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLIPTLAPAVVAVCAVAALGGCVAYPAGQPAYGYYDGYYDGYGAPAYGYAEPPVQSSL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEE
FLGFGGYSGRDYDRGYWGGRGYDHGYNHDHGNWNGHSGGNGGPPRGQPPQAGGPPMSPGG
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NSGGMHGIRPPVQAGAGQQQGGGNRGGSRGGEAWNEGGGRPH
CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA