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The map label for this gene is rodZ [H]

Identifier: 186476179

GI number: 186476179

Start: 1601443

End: 1602552

Strand: Reverse

Name: rodZ [H]

Synonym: Bphy_1421

Alternate gene names: 186476179

Gene position: 1602552-1601443 (Counterclockwise)

Preceding gene: 186476180

Following gene: 186476178

Centisome position: 46.06

GC content: 70.0

Gene sequence:

>1110_bases
ATGAGTGAGCCGCAGCACCCGCAACCGCACGACGTGGATACGCATTCGGATCGACCGCTGCCGGCGGCACCGGCAGTCGT
GCCGGGCGGGTTCGACTCGCTGGCTGCCGTCGGCGCCCGGCTAGCACAGTTGCGCGAATCGAAGGGCTGGTCGGTCGAAG
ACGTGTCGGCGCGCCTGAAAGTCTCGCCGGGCAAGCTGCGCGGGCTCGAAGCAGGCGATCTCACCCTGTTGCCGGACACG
ACGTTCGCGCTGGGCGTGGTGCGCAGCTACGCGAAGATGGTCGGGGCCGATCCGGCACCGATGACGCAGGCGCTGCGCCG
CGAGAAAGGGGTGCCGGAGCCGGCGCTGACCATGCCGGCGTCGGCCGGTACGGATTTGCCGCGAGGGAAAGTGTCGCTGT
CGCTTGGCGGCGGCGGTGCGCCGCGCCGTCGTTCGTGGCTTTGGGGCGTAGCCCTGGCCGTGGTCGTGCTGATCGCGCTC
GCCATGTGGCATACGAACAATGGAGATTCGAACGCGTGGCTCGCACGTCTGAAGGGCATGGCGGGCGGCTCGGCGCGCAC
GGAAGGTGCGTCGTCGGTTGCGGGGCAACCGGCGAGCGGCGCGTCAGTGACGGGCGCAGTGACGTCGGCATCGGCGACTC
AGGCGGACGCACCCGCGGATACGCAGGCGGCGGACGCAGGAGGCGCGTCGTCGGCAATGCCCATGCCTACGCCGCTGCCG
ATGGCAGGCGTCGCGCCGGCATCGAATGCGGCATCGGTGTCTGCGCCGGCTGCTGCTGCCCCGAAGGCCGCAAGTGCGGC
ACCCGCTGTCGCGATGGCTGCATCGGCCGCGCCGGCCAGCGAGCCGACGGCCGCACCTCAGGGCGCGTCGACGGTCTCGC
TGACGGTCAGGCAGGACAGCTGGTTTAGCGTGCGTCAGAAGGACGGCAAGGAAGTGTTCTCCGGGCTCGTGCACGCAGGC
GAAACGAAGGAAGTCAGCGGACAGCCGCCGCTCAAGGTGACGGTCGGCAACAAGGCGGGTCTGGACTCGATCACGCTGGA
CGGCCAGCCGGTCGACCCGGCCAAATACGCGTCGGCCAAGGGCAATGTGGCACGCTTCGCGTTGCCCTGA

Upstream 100 bases:

>100_bases
CAGCCGCACATTTTGTTATAAACGGTCTGCGAAACCGGGCAAGGCATCGAGCCGCCCGCTCGCATGAGTGATTAAAAGAA
TCGACGCGAAAGGATTTGGG

Downstream 100 bases:

>100_bases
CGCAAATCAATCGCGTGCGCCGCGGCTTCGGGGCTGCGGCGCTTTTTCAATTCATGCGTCGTTTTTTGCAACAGGGCCCG
GCGTGTACCGGGTGCTGAGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSEPQHPQPHDVDTHSDRPLPAAPAVVPGGFDSLAAVGARLAQLRESKGWSVEDVSARLKVSPGKLRGLEAGDLTLLPDT
TFALGVVRSYAKMVGADPAPMTQALRREKGVPEPALTMPASAGTDLPRGKVSLSLGGGGAPRRRSWLWGVALAVVVLIAL
AMWHTNNGDSNAWLARLKGMAGGSARTEGASSVAGQPASGASVTGAVTSASATQADAPADTQAADAGGASSAMPMPTPLP
MAGVAPASNAASVSAPAAAAPKAASAAPAVAMAASAAPASEPTAAPQGASTVSLTVRQDSWFSVRQKDGKEVFSGLVHAG
ETKEVSGQPPLKVTVGNKAGLDSITLDGQPVDPAKYASAKGNVARFALP

Sequences:

>Translated_369_residues
MSEPQHPQPHDVDTHSDRPLPAAPAVVPGGFDSLAAVGARLAQLRESKGWSVEDVSARLKVSPGKLRGLEAGDLTLLPDT
TFALGVVRSYAKMVGADPAPMTQALRREKGVPEPALTMPASAGTDLPRGKVSLSLGGGGAPRRRSWLWGVALAVVVLIAL
AMWHTNNGDSNAWLARLKGMAGGSARTEGASSVAGQPASGASVTGAVTSASATQADAPADTQAADAGGASSAMPMPTPLP
MAGVAPASNAASVSAPAAAAPKAASAAPAVAMAASAAPASEPTAAPQGASTVSLTVRQDSWFSVRQKDGKEVFSGLVHAG
ETKEVSGQPPLKVTVGNKAGLDSITLDGQPVDPAKYASAKGNVARFALP
>Mature_368_residues
SEPQHPQPHDVDTHSDRPLPAAPAVVPGGFDSLAAVGARLAQLRESKGWSVEDVSARLKVSPGKLRGLEAGDLTLLPDTT
FALGVVRSYAKMVGADPAPMTQALRREKGVPEPALTMPASAGTDLPRGKVSLSLGGGGAPRRRSWLWGVALAVVVLIALA
MWHTNNGDSNAWLARLKGMAGGSARTEGASSVAGQPASGASVTGAVTSASATQADAPADTQAADAGGASSAMPMPTPLPM
AGVAPASNAASVSAPAAAAPKAASAAPAVAMAASAAPASEPTAAPQGASTVSLTVRQDSWFSVRQKDGKEVFSGLVHAGE
TKEVSGQPPLKVTVGNKAGLDSITLDGQPVDPAKYASAKGNVARFALP

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=336, Percent_Identity=26.1904761904762, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 36855; Mature: 36724

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPQHPQPHDVDTHSDRPLPAAPAVVPGGFDSLAAVGARLAQLRESKGWSVEDVSARLK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE
VSPGKLRGLEAGDLTLLPDTTFALGVVRSYAKMVGADPAPMTQALRREKGVPEPALTMPA
ECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEECCC
SAGTDLPRGKVSLSLGGGGAPRRRSWLWGVALAVVVLIALAMWHTNNGDSNAWLARLKGM
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
AGGSARTEGASSVAGQPASGASVTGAVTSASATQADAPADTQAADAGGASSAMPMPTPLP
CCCCCCCCCCHHHCCCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MAGVAPASNAASVSAPAAAAPKAASAAPAVAMAASAAPASEPTAAPQGASTVSLTVRQDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC
WFSVRQKDGKEVFSGLVHAGETKEVSGQPPLKVTVGNKAGLDSITLDGQPVDPAKYASAK
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHCCC
GNVARFALP
CCEEEECCC
>Mature Secondary Structure 
SEPQHPQPHDVDTHSDRPLPAAPAVVPGGFDSLAAVGARLAQLRESKGWSVEDVSARLK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE
VSPGKLRGLEAGDLTLLPDTTFALGVVRSYAKMVGADPAPMTQALRREKGVPEPALTMPA
ECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEECCC
SAGTDLPRGKVSLSLGGGGAPRRRSWLWGVALAVVVLIALAMWHTNNGDSNAWLARLKGM
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
AGGSARTEGASSVAGQPASGASVTGAVTSASATQADAPADTQAADAGGASSAMPMPTPLP
CCCCCCCCCCHHHCCCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MAGVAPASNAASVSAPAAAAPKAASAAPAVAMAASAAPASEPTAAPQGASTVSLTVRQDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCC
WFSVRQKDGKEVFSGLVHAGETKEVSGQPPLKVTVGNKAGLDSITLDGQPVDPAKYASAK
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCHHHHHCCC
GNVARFALP
CCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA