| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476158
Identifier: 186476158
GI number: 186476158
Start: 1574504
End: 1575733
Strand: Direct
Name: 186476158
Synonym: Bphy_1400
Alternate gene names: NA
Gene position: 1574504-1575733 (Clockwise)
Preceding gene: 186476157
Following gene: 186476160
Centisome position: 45.25
GC content: 63.98
Gene sequence:
>1230_bases ATGCGCCGCGCTGACACGCGCACGAACCGCGAGCCGGCGCGCCGATGCTGTTCGAGCGGCGCAGTGCGCACCATTGCGGT CGCCGTCACGCTGTCGCTGGCAGCGTACGGCTCCGTGTCATTCGCGACAGAATCGGCGGCCCGCTACGCCTTCGCGGTCA TCGGCAGTACGCTGCAGAGTCCTGCCGACGAAGCACTCACGCAAAGGCTGCTCGAAGCAATCGGACGCGACCCGGACGTC TCGTTCGTCGTGTATGACGGCAATCTGAAAAGCGGCAAGGAAGCGTGTCGCGACTCGCTGTTCGAGACGCGCCATACGCT GCTCGAAACGTCGAAGGCCGCGCTGATCTTCATTCCTGGCCAGCATGACTGGACCGATTGCGCAACGGCGGATGCAGGCG GCTACGATCCCGTCGAACGACTGGATCTATTGCGGCAGACCTTGTTCGGCGAAACGTCGTCAATGGGACAGAATCCGATC CCGCTCGCGCGGGAAAGCGAAGTGTCCCGATTCCGGCCATATCGGGAGAATGTGCGCTGGATGTTCGGAGAAACGGTGTT CGTCGGCCTGAACGTGCCGGGCCCGAACAATCACTTTCTGTACGCGGGCGGCCGCAACGGCGAATTCGAGGACCGCGTGA TCGCCAATGCCTTCTGGCTCGACCATGCGGCCGAGTATGCAAAACGCCGCGGCGCCCGCGCCATCGTCGTGCTGGTGCAA GGCGACTTCGATCCCGAGCGCTACGAGCGGCCCGAGCGATTCGCCTGGCTGCGCTTCGGACATCGATCGAAACGCGATGG CTTCATGGAATTCAAGCGCAGTCTGGTGAAACTGGCCGAGACATTCCACGGACCTGTGGTCGTGATTCATCAGGACGACG ATCGATCGCACACGGGCTTCATGATCGACCAGCCGCTACGCAACGACAAAGGCGATCTCGTAACGAATCTGACGCGTATC GCATTCGCGCCGCGCATTCCTCAGAACCAGTGGGTGCAAATCGACGTCAATCTGGCGAAACGCCCGCCGCTGCGCGTCAC CTTGCGCGAGGTTCCGAAGAGTCTGCCGCTGCCTGCCGCGCCCGCCTTGCCGAACACGGCGCCGCCCGTACCGCCGCCGA TGCCGCCCGTACCGGAAGCCTCACCCGCTTCGGAATTGCCGCCGATACTGCCCGAGCCGTCGCCCCCAGGCATGGGCGCG AACGGAACGAACCCGGGCGACGGCGACTAG
Upstream 100 bases:
>100_bases ACGCTCGTCGAACGCTTGCGCGACATCGACCCAAACGATCTGCGGCCGCGCGACGCGCTCGACCTGCTCTACGAACTGCA TGAACTGGCCAAGTCGCCAG
Downstream 100 bases:
>100_bases CGCCACTCCACGCCACACAGTAGATGCGACAACGGGCGCTCGCGCGCCCGCTTCGGGAACTGCTCCGCTGCCGGTCTCGG ACCTGACGATCCTGCCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRRADTRTNREPARRCCSSGAVRTIAVAVTLSLAAYGSVSFATESAARYAFAVIGSTLQSPADEALTQRLLEAIGRDPDV SFVVYDGNLKSGKEACRDSLFETRHTLLETSKAALIFIPGQHDWTDCATADAGGYDPVERLDLLRQTLFGETSSMGQNPI PLARESEVSRFRPYRENVRWMFGETVFVGLNVPGPNNHFLYAGGRNGEFEDRVIANAFWLDHAAEYAKRRGARAIVVLVQ GDFDPERYERPERFAWLRFGHRSKRDGFMEFKRSLVKLAETFHGPVVVIHQDDDRSHTGFMIDQPLRNDKGDLVTNLTRI AFAPRIPQNQWVQIDVNLAKRPPLRVTLREVPKSLPLPAAPALPNTAPPVPPPMPPVPEASPASELPPILPEPSPPGMGA NGTNPGDGD
Sequences:
>Translated_409_residues MRRADTRTNREPARRCCSSGAVRTIAVAVTLSLAAYGSVSFATESAARYAFAVIGSTLQSPADEALTQRLLEAIGRDPDV SFVVYDGNLKSGKEACRDSLFETRHTLLETSKAALIFIPGQHDWTDCATADAGGYDPVERLDLLRQTLFGETSSMGQNPI PLARESEVSRFRPYRENVRWMFGETVFVGLNVPGPNNHFLYAGGRNGEFEDRVIANAFWLDHAAEYAKRRGARAIVVLVQ GDFDPERYERPERFAWLRFGHRSKRDGFMEFKRSLVKLAETFHGPVVVIHQDDDRSHTGFMIDQPLRNDKGDLVTNLTRI AFAPRIPQNQWVQIDVNLAKRPPLRVTLREVPKSLPLPAAPALPNTAPPVPPPMPPVPEASPASELPPILPEPSPPGMGA NGTNPGDGD >Mature_409_residues MRRADTRTNREPARRCCSSGAVRTIAVAVTLSLAAYGSVSFATESAARYAFAVIGSTLQSPADEALTQRLLEAIGRDPDV SFVVYDGNLKSGKEACRDSLFETRHTLLETSKAALIFIPGQHDWTDCATADAGGYDPVERLDLLRQTLFGETSSMGQNPI PLARESEVSRFRPYRENVRWMFGETVFVGLNVPGPNNHFLYAGGRNGEFEDRVIANAFWLDHAAEYAKRRGARAIVVLVQ GDFDPERYERPERFAWLRFGHRSKRDGFMEFKRSLVKLAETFHGPVVVIHQDDDRSHTGFMIDQPLRNDKGDLVTNLTRI AFAPRIPQNQWVQIDVNLAKRPPLRVTLREVPKSLPLPAAPALPNTAPPVPPPMPPVPEASPASELPPILPEPSPPGMGA NGTNPGDGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45144; Mature: 45144
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRADTRTNREPARRCCSSGAVRTIAVAVTLSLAAYGSVSFATESAARYAFAVIGSTLQS CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC PADEALTQRLLEAIGRDPDVSFVVYDGNLKSGKEACRDSLFETRHTLLETSKAALIFIPG HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC QHDWTDCATADAGGYDPVERLDLLRQTLFGETSSMGQNPIPLARESEVSRFRPYRENVRW CCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHCCHHHCCEE MFGETVFVGLNVPGPNNHFLYAGGRNGEFEDRVIANAFWLDHAAEYAKRRGARAIVVLVQ EECCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE GDFDPERYERPERFAWLRFGHRSKRDGFMEFKRSLVKLAETFHGPVVVIHQDDDRSHTGF CCCCHHHHCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCE MIDQPLRNDKGDLVTNLTRIAFAPRIPQNQWVQIDVNLAKRPPLRVTLREVPKSLPLPAA EECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEHHHCCCCCCCCCC PALPNTAPPVPPPMPPVPEASPASELPPILPEPSPPGMGANGTNPGDGD CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRADTRTNREPARRCCSSGAVRTIAVAVTLSLAAYGSVSFATESAARYAFAVIGSTLQS CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC PADEALTQRLLEAIGRDPDVSFVVYDGNLKSGKEACRDSLFETRHTLLETSKAALIFIPG HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC QHDWTDCATADAGGYDPVERLDLLRQTLFGETSSMGQNPIPLARESEVSRFRPYRENVRW CCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHCCHHHCCEE MFGETVFVGLNVPGPNNHFLYAGGRNGEFEDRVIANAFWLDHAAEYAKRRGARAIVVLVQ EECCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE GDFDPERYERPERFAWLRFGHRSKRDGFMEFKRSLVKLAETFHGPVVVIHQDDDRSHTGF CCCCHHHHCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCE MIDQPLRNDKGDLVTNLTRIAFAPRIPQNQWVQIDVNLAKRPPLRVTLREVPKSLPLPAA EECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEHHHCCCCCCCCCC PALPNTAPPVPPPMPPVPEASPASELPPILPEPSPPGMGANGTNPGDGD CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA