| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476120
Identifier: 186476120
GI number: 186476120
Start: 1530011
End: 1531027
Strand: Reverse
Name: 186476120
Synonym: Bphy_1362
Alternate gene names: NA
Gene position: 1531027-1530011 (Counterclockwise)
Preceding gene: 186476121
Following gene: 186476117
Centisome position: 44.01
GC content: 68.14
Gene sequence:
>1017_bases ATGACGGAAGCCGCCGGGCCGACCGTTTCGTTCGAGGCGCCGTCATCGGCCCGGCTCGATGCGCTGTCCGACGCCGCCGT GCGAGACATCGCGTGGCTGCTGTTCAGTCCCGATCTGTTGCGCGCGCAACCACCCGCGGGCGCGCTCGCGAAGCCGTTCG AATCGCCCGACGAAGCCGCCGCGGCGATGGCCTGGCTGGAAGCGCAGGATGCCGACCCTGCTGGCCTGCATCGCCATATC GATGCGGCGCGTGTGACGCGACTCGGCCGCTATGCCGAATGTCTGCTCGCGTGGTTTCTGAAGCACGGCCCCGCCGCACG CCTGATCGCCGCGAATGTCCCGCTGCGGCGTGCGGGCGTGACGCTCGGCGAATGCGATTTTCTTGCCGAGACGCGGGCGG GCCGGCGGCTGCACTGGGAGCTGGCCGTCAAATGCTATCTGCACGCGGGCGACGGCCGGGGCGAACTCGCCGACTACGTG GGCCCGAATCTGCAAGATCGCTTCGATCTTAAGCTCGCGCATCTGCTCCACCATCAGCTGCGGCTTAGCGCACGCGAGGA ATTCGCATCGCTCGGTCATCGCGGACCGTGGGATGCGCAGATGTTCGTCAAAGGGTGGCTGTTCTACCGCAACGGACGCG CCGAGCGAGACCCCGCCGAAATCGAACCGGCGCACGCGCGCGGCTGGTGGACGACGCGTGCAGAATGGACGGAGTTTTCA GCGGGCCATGCCGACGCATGGATGGTGCTGCCGCGCCTCGAATGGCTTGCGCTGCGTGTGCGTCACGCAGGTGGCGCGTC ACCTGAGGCAACAGGCGGTGCGAGTCACGCAGCGAGCTTCGTATCGGCGGACATGCTCGCCCAGCAACTCGCGGGACAGA CGGGGCCGGCAATGGTGGCGGCGTTCGTCGAGCACGCCGCGGGACAATGGAGCGAGCGCTCGCGCGGCTTTATCGTGCCC GACGACTGGCCTGAGCAGGCTCACGCGTTTGCACGTCAGTCGACGCGCCGTCCCTAG
Upstream 100 bases:
>100_bases ATCTGCTGCGCAGCCTCGGCGACAAGGCGAAGTCGTGGCAGGACCTGTGTCTCGCTCGCGATATGTGGCACAAGGCGAGT ACAGAAGGGGATGCTGCGAC
Downstream 100 bases:
>100_bases AGGCACCCGCTCGCGCCGAAGCGACGCGTTACCACCAACGATAGAAATGATGCACGGGCCCGACGCCGTGCCCGACGTCG AGTCGTCCGCTCTGCTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTEAAGPTVSFEAPSSARLDALSDAAVRDIAWLLFSPDLLRAQPPAGALAKPFESPDEAAAAMAWLEAQDADPAGLHRHI DAARVTRLGRYAECLLAWFLKHGPAARLIAANVPLRRAGVTLGECDFLAETRAGRRLHWELAVKCYLHAGDGRGELADYV GPNLQDRFDLKLAHLLHHQLRLSAREEFASLGHRGPWDAQMFVKGWLFYRNGRAERDPAEIEPAHARGWWTTRAEWTEFS AGHADAWMVLPRLEWLALRVRHAGGASPEATGGASHAASFVSADMLAQQLAGQTGPAMVAAFVEHAAGQWSERSRGFIVP DDWPEQAHAFARQSTRRP
Sequences:
>Translated_338_residues MTEAAGPTVSFEAPSSARLDALSDAAVRDIAWLLFSPDLLRAQPPAGALAKPFESPDEAAAAMAWLEAQDADPAGLHRHI DAARVTRLGRYAECLLAWFLKHGPAARLIAANVPLRRAGVTLGECDFLAETRAGRRLHWELAVKCYLHAGDGRGELADYV GPNLQDRFDLKLAHLLHHQLRLSAREEFASLGHRGPWDAQMFVKGWLFYRNGRAERDPAEIEPAHARGWWTTRAEWTEFS AGHADAWMVLPRLEWLALRVRHAGGASPEATGGASHAASFVSADMLAQQLAGQTGPAMVAAFVEHAAGQWSERSRGFIVP DDWPEQAHAFARQSTRRP >Mature_337_residues TEAAGPTVSFEAPSSARLDALSDAAVRDIAWLLFSPDLLRAQPPAGALAKPFESPDEAAAAMAWLEAQDADPAGLHRHID AARVTRLGRYAECLLAWFLKHGPAARLIAANVPLRRAGVTLGECDFLAETRAGRRLHWELAVKCYLHAGDGRGELADYVG PNLQDRFDLKLAHLLHHQLRLSAREEFASLGHRGPWDAQMFVKGWLFYRNGRAERDPAEIEPAHARGWWTTRAEWTEFSA GHADAWMVLPRLEWLALRVRHAGGASPEATGGASHAASFVSADMLAQQLAGQTGPAMVAAFVEHAAGQWSERSRGFIVPD DWPEQAHAFARQSTRRP
Specific function: Unknown
COG id: COG3782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37075; Mature: 36944
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAAGPTVSFEAPSSARLDALSDAAVRDIAWLLFSPDLLRAQPPAGALAKPFESPDEAA CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCCCHHHHH AAMAWLEAQDADPAGLHRHIDAARVTRLGRYAECLLAWFLKHGPAARLIAANVPLRRAGV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCC TLGECDFLAETRAGRRLHWELAVKCYLHAGDGRGELADYVGPNLQDRFDLKLAHLLHHQL CCCCHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH RLSAREEFASLGHRGPWDAQMFVKGWLFYRNGRAERDPAEIEPAHARGWWTTRAEWTEFS HHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCC AGHADAWMVLPRLEWLALRVRHAGGASPEATGGASHAASFVSADMLAQQLAGQTGPAMVA CCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH AFVEHAAGQWSERSRGFIVPDDWPEQAHAFARQSTRRP HHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TEAAGPTVSFEAPSSARLDALSDAAVRDIAWLLFSPDLLRAQPPAGALAKPFESPDEAA CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCCCHHHHH AAMAWLEAQDADPAGLHRHIDAARVTRLGRYAECLLAWFLKHGPAARLIAANVPLRRAGV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCC TLGECDFLAETRAGRRLHWELAVKCYLHAGDGRGELADYVGPNLQDRFDLKLAHLLHHQL CCCCHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH RLSAREEFASLGHRGPWDAQMFVKGWLFYRNGRAERDPAEIEPAHARGWWTTRAEWTEFS HHHHHHHHHHCCCCCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCC AGHADAWMVLPRLEWLALRVRHAGGASPEATGGASHAASFVSADMLAQQLAGQTGPAMVA CCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH AFVEHAAGQWSERSRGFIVPDDWPEQAHAFARQSTRRP HHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA