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The map label for this gene is tsf

Identifier: 186476095

GI number: 186476095

Start: 1496596

End: 1497477

Strand: Reverse

Name: tsf

Synonym: Bphy_1337

Alternate gene names: 186476095

Gene position: 1497477-1496596 (Counterclockwise)

Preceding gene: 186476096

Following gene: 186476094

Centisome position: 43.04

GC content: 61.9

Gene sequence:

>882_bases
ATGGCGGCAATTACCGCAAGCATGGTGGCAGAACTGCGCGCGAAGACCGATGCGCCGATGATGGAGTGCAAGAAGGCGCT
GACGGAAGCCGACGGCGACATGGCGCGTGCGGAAGAACTGCTGCGTGTGAAGCTCGGCAACAAGGCAAGCAAGGCAGCGT
CGCGCGTCACGGCTGAAGGCGTGATCGCTTCGTTCATCGAAGGCGGCGCAGGCGCGATCGTCGAGCTGAACTGCGAAACC
GACTTCGTCTCGAAGAACGACGACTTCATTGGTTTCTCGAAGAAGGTCGCAGAACTGGTCGTCAAGCAGAACCCGGCTGA
CGTCGGGGCTCTGTCGGCACTGGCGCTGGACGGCTCGACCGTCGACGCAGTGCGCTCGGCACTGGTCGGCAAGATCGGCG
AAAACCTGTCGATTCGCCGCTTCGCGCGCTTCGAAACGTCGAACAAGCTGGCAGCGTACCTGCACGGCACGCGCATCGGC
GTGCTGGTCGAGTACACGGGCGCGGACGAGCAGGTCGGCAAGGACGTCGCGATGCACATCGCGGCAATGAAGCCGGTGTC
GCTGTCGTCGGACGACGTTCCTGCCGATCTGATCGCGAAGGAGCGCAGCATCGCCGAGCAGAAGGCTGCCGAATCGGGCA
AGCCGGCTGAGATCGTGGCGAAGATGGTCGACGGTTCGGTGCAGAAGTACCTGAAGGAAGTGTCGCTGCTGAACCAGCCG
TTCGTGAAGAACGACAAGCAGACGATCGAGCAGATGCTGAAGGCGGCGAACGCAAGCGTGCAGAATTTCGCGCTGTTCGT
GGTCGGCGAAGGCATCGAGAAGCGTCAGGACGACTTCGCCGCTGAAGTTGCTGCGCAAGTGGCTGCTGCGAAGCAACAAT
AA

Upstream 100 bases:

>100_bases
GCAGCGCTCGAAGAAATAAACGTGCGCTGCGCGGAAACGAAATGCTGTCGCCGGCATCGAATGCGGGCGGCGTGTGACAG
ACAGACTCAAGGAGCGAATG

Downstream 100 bases:

>100_bases
GCGTCGTTTAAGCTTTACGCAATACCGTTTGACCCGCGGCGGGGCTGGACCCCGCCGCGGCCGGCAGCGCCCTTGGACTG
CCGCGCGCGAAAGCGCGTTG

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDMARAEELLRVKLGNKASKAASRVTAEGVIASFIEGGAGAIVELNCET
DFVSKNDDFIGFSKKVAELVVKQNPADVGALSALALDGSTVDAVRSALVGKIGENLSIRRFARFETSNKLAAYLHGTRIG
VLVEYTGADEQVGKDVAMHIAAMKPVSLSSDDVPADLIAKERSIAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQP
FVKNDKQTIEQMLKAANASVQNFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ

Sequences:

>Translated_293_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDMARAEELLRVKLGNKASKAASRVTAEGVIASFIEGGAGAIVELNCET
DFVSKNDDFIGFSKKVAELVVKQNPADVGALSALALDGSTVDAVRSALVGKIGENLSIRRFARFETSNKLAAYLHGTRIG
VLVEYTGADEQVGKDVAMHIAAMKPVSLSSDDVPADLIAKERSIAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQP
FVKNDKQTIEQMLKAANASVQNFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
>Mature_292_residues
AAITASMVAELRAKTDAPMMECKKALTEADGDMARAEELLRVKLGNKASKAASRVTAEGVIASFIEGGAGAIVELNCETD
FVSKNDDFIGFSKKVAELVVKQNPADVGALSALALDGSTVDAVRSALVGKIGENLSIRRFARFETSNKLAAYLHGTRIGV
LVEYTGADEQVGKDVAMHIAAMKPVSLSSDDVPADLIAKERSIAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQPF
VKNDKQTIEQMLKAANASVQNFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=306, Percent_Identity=27.1241830065359, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI291084500, Length=326, Percent_Identity=24.8466257668712, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI291084498, Length=100, Percent_Identity=39, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI291084502, Length=100, Percent_Identity=39, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1786366, Length=285, Percent_Identity=49.8245614035088, Blast_Score=245, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17561440, Length=292, Percent_Identity=27.0547945205479, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI19921466, Length=289, Percent_Identity=32.8719723183391, Blast_Score=112, Evalue=2e-25,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_BURP8 (B2JIC5)

Other databases:

- EMBL:   CP001043
- RefSeq:   YP_001857565.1
- ProteinModelPortal:   B2JIC5
- SMR:   B2JIC5
- GeneID:   6242828
- GenomeReviews:   CP001043_GR
- KEGG:   bph:Bphy_1337
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- ProtClustDB:   PRK09377
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 31047; Mature: 30916

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAITASMVAELRAKTDAPMMECKKALTEADGDMARAEELLRVKLGNKASKAASRVTAEG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VIASFIEGGAGAIVELNCETDFVSKNDDFIGFSKKVAELVVKQNPADVGALSALALDGST
HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEECCCH
VDAVRSALVGKIGENLSIRRFARFETSNKLAAYLHGTRIGVLVEYTGADEQVGKDVAMHI
HHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHH
AAMKPVSLSSDDVPADLIAKERSIAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQP
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
FVKNDKQTIEQMLKAANASVQNFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
CCCCCHHHHHHHHHHHCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAITASMVAELRAKTDAPMMECKKALTEADGDMARAEELLRVKLGNKASKAASRVTAEG
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VIASFIEGGAGAIVELNCETDFVSKNDDFIGFSKKVAELVVKQNPADVGALSALALDGST
HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEECCCH
VDAVRSALVGKIGENLSIRRFARFETSNKLAAYLHGTRIGVLVEYTGADEQVGKDVAMHI
HHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHH
AAMKPVSLSSDDVPADLIAKERSIAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQP
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
FVKNDKQTIEQMLKAANASVQNFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
CCCCCHHHHHHHHHHHCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA