Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476054

Identifier: 186476054

GI number: 186476054

Start: 1454234

End: 1455424

Strand: Direct

Name: 186476054

Synonym: Bphy_1295

Alternate gene names: NA

Gene position: 1454234-1455424 (Clockwise)

Preceding gene: 186476053

Following gene: 186476065

Centisome position: 41.8

GC content: 59.7

Gene sequence:

>1191_bases
ATGGAAGGCTTCGTTACCGACTGGCTGAATCTCGCGATTCGCTGGTTTCACGTTATCGCCGCAATCGCATGGATCGGCGA
GTCGTTCTATTTCGTCGCGCTCGACAACAGCCTGAAACCGCCGACGGACCCTAACCAGCGCCGGCGCGGCGTGTTCGGCG
AACTGTGGCATGTGCATGGCGGCGGCTTCTACAACATGCAGAAGTACACCGTCGCCCCGCCCGAAATGCCCGACGACCTG
CACTGGTCGAAATGGCCGTCTTACACGACGTGGCTCTCGGGCTTCGGTCTATTCACGGTGCTGTATCTGTTCGCGCCGAA
CACATACCTGATCGACAAGAACGTGCTCGACATGGGCCCTGTTGTTGCGATCTTCTCGGCGCTCGGTTTTCTTGCCGCAG
GCTGGATCGTGTACGACTCGCTGTGCCGACTGCTCGGCAACAATGACAAGGTTCTCGGTATCTGCGTCGGTCTCTATGTG
CTGATTGCCGCGTACCTCGCGTGCCACATCTTCGCGGGCCGCGCGGCCTATCTGATCATGGGCGCGATGCTGGCGACCAT
CATGTCGGCGAACGTGTTCTTCGTGATCATTCCGGGTCAGCGCAAGATGGTCGACGCGATGCTCAAGGGCGACACGCCGA
ACCCGATCTATGGCAAGCGCGGCAAGCAGCGCTCCGTGCACAACACGTATTTCACGCTGCCCGTGGTGTTCGCAATGCTG
TCGAATCACTATGCGATGACGTACACGCATCCATACAACTGGGCGGTGCTCGTTGTCATCATGCTGGCAGGCGCGCTGAT
CCGCCAGTTCTTCGTGATGCGTCACCGCGGACAGGTATTGTGGTACCTGCCGCTTGGCGGCGTTGCACTGATGTTCGGCG
CGCTCTTCTGGACGATGCCCCGGCCTGTCGTGCCAGTTGCCGAGGCTGCCAACGCTCCTGTCGTGAAGGTTGGCGATATC
GTGCCTGTATTGCAGCAGCGCTGCGTGGCTTGTCACTCTGCGCATCCGACGATGATGGGCAGCGCACCCGCTGGCGTGCT
GCTCGATACGCCTGAAGAGATCTCGACGAACGCACAGCGTATCTACCAGCAGGCCGTGACGCTAAAGTCGATGCCGCTTG
GCAATGTCACACATATGACTGATGACGAGCGTCTGAAGATCGCTGCCTGGTTCCATGGCGGAGCGCATTAA

Upstream 100 bases:

>100_bases
GCATCGATCCGATAGCGGACCTGCACCGGCGTAATACACCCGAATGCCGCGCAACACTCGAGATGCTGCGCGAACAACGA
ATCAGAAGTGGAGGAGTTTC

Downstream 100 bases:

>100_bases
GGCCTGCTTTCCATGGCGTGAGGTCGGTTCTTCACGGTCGGGCTGTTCGCGAATGCGGCGGCCCGTTTTTTTCTGTCTAC
GACGCAGTCGCGACTATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHGGGFYNMQKYTVAPPEMPDDL
HWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGPVVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYV
LIAAYLACHIFAGRAAYLIMGAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML
SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMPRPVVPVAEAANAPVVKVGDI
VPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQRIYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH

Sequences:

>Translated_396_residues
MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHGGGFYNMQKYTVAPPEMPDDL
HWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGPVVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYV
LIAAYLACHIFAGRAAYLIMGAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML
SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMPRPVVPVAEAANAPVVKVGDI
VPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQRIYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH
>Mature_396_residues
MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHGGGFYNMQKYTVAPPEMPDDL
HWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGPVVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYV
LIAAYLACHIFAGRAAYLIMGAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML
SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMPRPVVPVAEAANAPVVKVGDI
VPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQRIYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH

Specific function: Unknown

COG id: COG3748

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44059; Mature: 44059

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHHEEECC
GGFYNMQKYTVAPPEMPDDLHWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGP
CCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH
VVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYVLIAAYLACHIFAGRAAYLIM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML
HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMP
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCC
RPVVPVAEAANAPVVKVGDIVPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQR
CCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHH
IYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHHEEECC
GGFYNMQKYTVAPPEMPDDLHWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGP
CCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH
VVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYVLIAAYLACHIFAGRAAYLIM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML
HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMP
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCC
RPVVPVAEAANAPVVKVGDIVPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQR
CCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHH
IYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA