| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476046
Identifier: 186476046
GI number: 186476046
Start: 1445017
End: 1445226
Strand: Direct
Name: 186476046
Synonym: Bphy_1287
Alternate gene names: NA
Gene position: 1445017-1445226 (Clockwise)
Preceding gene: 186476040
Following gene: 186476051
Centisome position: 41.53
GC content: 55.71
Gene sequence:
>210_bases ATGAGCGACCACGTGTACAAGCACATCGAGCTGACGGGTTCGTCCACGAAATCCAGCGACGACGCGATCCGCTGCGCGAT CGAAAAAGCAGGTAAAACGGTGCGCAATCTGCATTGGTTCGAAGTCGTGGAGACGCGCGGCCATATCGAAGACAACAAGG TCTCGCACTGGCAGGTCACATTGAAGGTGGGCTTGCGCATCGAAGATTGA
Upstream 100 bases:
>100_bases GCCACATCCGGTTGCAGCACGTCGGGCACGCGACGTGCGTTCCGGTTCGTTCACGCGAAATACATTGCCTATACTTTTTT CGACCACCAGGAGGTACATC
Downstream 100 bases:
>100_bases GGCAGCGGCGAGCTGCGCGCGGCGAGCGCGCGAAGAGGACGGTGCACGTCTGCAGCTACGAGTCGGACGCGCATGAAAAA AGCTGCATCCGATGTAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSDHVYKHIELTGSSTKSSDDAIRCAIEKAGKTVRNLHWFEVVETRGHIEDNKVSHWQVTLKVGLRIED
Sequences:
>Translated_69_residues MSDHVYKHIELTGSSTKSSDDAIRCAIEKAGKTVRNLHWFEVVETRGHIEDNKVSHWQVTLKVGLRIED >Mature_68_residues SDHVYKHIELTGSSTKSSDDAIRCAIEKAGKTVRNLHWFEVVETRGHIEDNKVSHWQVTLKVGLRIED
Specific function: Unknown
COG id: COG3360
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7903; Mature: 7772
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHVYKHIELTGSSTKSSDDAIRCAIEKAGKTVRNLHWFEVVETRGHIEDNKVSHWQVT CCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHCCCEEEEEECCCCCCCCCCEEEEEE LKVGLRIED EEEEEEECC >Mature Secondary Structure SDHVYKHIELTGSSTKSSDDAIRCAIEKAGKTVRNLHWFEVVETRGHIEDNKVSHWQVT CCCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHCCCEEEEEECCCCCCCCCCEEEEEE LKVGLRIED EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA