| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476040
Identifier: 186476040
GI number: 186476040
Start: 1438199
End: 1438402
Strand: Direct
Name: 186476040
Synonym: Bphy_1281
Alternate gene names: NA
Gene position: 1438199-1438402 (Clockwise)
Preceding gene: 186476039
Following gene: 186476046
Centisome position: 41.34
GC content: 55.88
Gene sequence:
>204_bases ATGTCATCGAATCTGCACGACCTCCCCGACAGCCCCTGCATCGGTGTCTGTTCGACACTCTTCGACGAAGTTTGCAAAGG CTGTGGCCGCACGGCGGCGGAGGTGTCGAACTGGGTGTTTCTTACCGATGAGGAAAAACGCGCTATCTGGACGCGCATCG AATGCGATGGTACGGCGATGCGATTCAAGTACGACAAGCTATGA
Upstream 100 bases:
>100_bases ACTGCAACGTATTCGTCCGCAACAAACAGAGCACCGGAAGCCCATTTCGCTTTTCGTTTACCATAGCGGACCGCACGCAT TTACCGCCCAAGGTATTCCG
Downstream 100 bases:
>100_bases CGCCCATGCATACGGACGACGGTCCACACGCGCATCGGTTCGATCGGTTACCTGGATGTGCAATGAAAAACGCCGGCTCT TGACGAGGCCGGCGTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MSSNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLTDEEKRAIWTRIECDGTAMRFKYDKL
Sequences:
>Translated_67_residues MSSNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLTDEEKRAIWTRIECDGTAMRFKYDKL >Mature_66_residues SSNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLTDEEKRAIWTRIECDGTAMRFKYDKL
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7562; Mature: 7430
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 7.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLTDEEKRAIWTRIECDGTAM CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCEEEEEECCCCCEE RFKYDKL EEEECCC >Mature Secondary Structure SSNLHDLPDSPCIGVCSTLFDEVCKGCGRTAAEVSNWVFLTDEEKRAIWTRIECDGTAM CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCEEEEEECCCCCEE RFKYDKL EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA