| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476001
Identifier: 186476001
GI number: 186476001
Start: 1393894
End: 1394562
Strand: Direct
Name: 186476001
Synonym: Bphy_1242
Alternate gene names: NA
Gene position: 1393894-1394562 (Clockwise)
Preceding gene: 186475997
Following gene: 186476005
Centisome position: 40.06
GC content: 66.07
Gene sequence:
>669_bases ATGCAGGCGGCGCTCGCCGCCCAACTTCCACACTGGGGATCCATCGACGTGACGCATCTGGTGTTTATCTGTGGCCACGC GGGCACAGGCAAGACGACGCTCGCCAAACGGCTGATCGGCCCGCTGATGAAGGCGACGGGCGAAGCCTGCTGCCTGCTCG ACAAGGACACGCTGTATGGCGTCTACAGCGCGGCCGCGATCGGCGCGTTGACGGGCGATCCGAACGATCGCGACAGCCCG CTCTTTCTGCAGCACTTTCGCGACCCGGAGTATCGAGGGCTCTTCGATACGGCCGCGGAGAATCTGCGGCTCGGCATCGG CGTGATCGCCGTCGGCCCGCTATCGCGCGAAGTGCGCGAGCGGCGGCTTTTCGATCATGTGTGGCTCGGCGTGCCGAAGG ACGCGAAAATCAGCGTCGTCTGGGTCTCGACATCGGAAGAGACGGCGCGCGAACGCATCGCTGCGCGCGGCAATCCGAAC GACGCCTACAAGCTCGCGCATTGGGAGGACTACCGGCAGCGCCGCTTCGTACCGGCGGCCCGCGAGCGCGAAGGCCTGCT GATGTTCGACAACACGTCGCCTACGCCCGCCGATTTCGACACGTTGCTCGCCGAAATCGTGCGGTCGCCGCAATCGCCCG GCGTCATGCTGCCGCCGATGCCCGTATGA
Upstream 100 bases:
>100_bases AGATTTGACATGTGATAGCACATAATATCGCTGCGATTCGCGGCGTCAATCGGCCGGATCGCATAGGTGTTGCGACCGGT CGTCATCACGTTCAAGATCG
Downstream 100 bases:
>100_bases ACGCGCCGCGCATCGGATCGAACAACGCCGCCAACACGAAACGGGCGTCGACCAGGAAGGCAGGAAGCCCGTTTCGCTAT TGACGCACACCGCTCTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: P-Loop ATPase Protein; ATP-Ase; Transcriptional Regulator; Shikimate Kinase
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MQAALAAQLPHWGSIDVTHLVFICGHAGTGKTTLAKRLIGPLMKATGEACCLLDKDTLYGVYSAAAIGALTGDPNDRDSP LFLQHFRDPEYRGLFDTAAENLRLGIGVIAVGPLSREVRERRLFDHVWLGVPKDAKISVVWVSTSEETARERIAARGNPN DAYKLAHWEDYRQRRFVPAAREREGLLMFDNTSPTPADFDTLLAEIVRSPQSPGVMLPPMPV
Sequences:
>Translated_222_residues MQAALAAQLPHWGSIDVTHLVFICGHAGTGKTTLAKRLIGPLMKATGEACCLLDKDTLYGVYSAAAIGALTGDPNDRDSP LFLQHFRDPEYRGLFDTAAENLRLGIGVIAVGPLSREVRERRLFDHVWLGVPKDAKISVVWVSTSEETARERIAARGNPN DAYKLAHWEDYRQRRFVPAAREREGLLMFDNTSPTPADFDTLLAEIVRSPQSPGVMLPPMPV >Mature_222_residues MQAALAAQLPHWGSIDVTHLVFICGHAGTGKTTLAKRLIGPLMKATGEACCLLDKDTLYGVYSAAAIGALTGDPNDRDSP LFLQHFRDPEYRGLFDTAAENLRLGIGVIAVGPLSREVRERRLFDHVWLGVPKDAKISVVWVSTSEETARERIAARGNPN DAYKLAHWEDYRQRRFVPAAREREGLLMFDNTSPTPADFDTLLAEIVRSPQSPGVMLPPMPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24447; Mature: 24447
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAALAAQLPHWGSIDVTHLVFICGHAGTGKTTLAKRLIGPLMKATGEACCLLDKDTLYG CCCCHHHCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHH VYSAAAIGALTGDPNDRDSPLFLQHFRDPEYRGLFDTAAENLRLGIGVIAVGPLSREVRE HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHEEEEEEEEECCCHHHHHH RRLFDHVWLGVPKDAKISVVWVSTSEETARERIAARGNPNDAYKLAHWEDYRQRRFVPAA HHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCC REREGLLMFDNTSPTPADFDTLLAEIVRSPQSPGVMLPPMPV CCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQAALAAQLPHWGSIDVTHLVFICGHAGTGKTTLAKRLIGPLMKATGEACCLLDKDTLYG CCCCHHHCCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHH VYSAAAIGALTGDPNDRDSPLFLQHFRDPEYRGLFDTAAENLRLGIGVIAVGPLSREVRE HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHEEEEEEEEECCCHHHHHH RRLFDHVWLGVPKDAKISVVWVSTSEETARERIAARGNPNDAYKLAHWEDYRQRRFVPAA HHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCC REREGLLMFDNTSPTPADFDTLLAEIVRSPQSPGVMLPPMPV CCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA