| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is blaA [H]
Identifier: 186475929
GI number: 186475929
Start: 1304606
End: 1305508
Strand: Reverse
Name: blaA [H]
Synonym: Bphy_1164
Alternate gene names: 186475929
Gene position: 1305508-1304606 (Counterclockwise)
Preceding gene: 186475931
Following gene: 186475928
Centisome position: 37.52
GC content: 68.11
Gene sequence:
>903_bases ATGGTTACGAGGCGGGCTTTCACTATCGCGTTGGGGGGTGGATTGGCGGGTATTGCGGTTCAGGCATTCGGCACCGCTGC GGCTGCGTCCGCACAGGGTCGCGCGGCGCATGGCGGCGCGCTCGACAAGCGGTTCGCGCAGATCGAGGCGGAAACGGGCG GCCGTCTGGGTGTCGCGATCCTCGATACGGCAAATGGCCAATTGCAAGGCTGGCGCGCCCGCGAGCGCTTTCCCATGTGC AGTACGTTCAAGTTCCTGCTCGCGTCGGCTGTGCTGATGCGCAAGGATCAAGGCAAAGAACAACTTGGGCGCAGGATCGT GTACGCGAAGGATGCGGTCGTCGCCAATTCGCCCGTCAGCGGCCCGCGTGCGGGCGGCGACGGGATGACCGTGTCGGAAC TGTGCGAAGCGGCGCTCACGCGCAGCGACAACACGGCGGCGAATCTGTTGCTGGAGAGCATCGGCGGGCCGCCGGCGCTG ACGGTGTTCGCGCGCGGCATCGGCGACGGCGTTACGCGGCTCGACCGCAACGAACCGACGCTCAACGAGGCGATCGAAGG CGATCCACGCGATACCACGACGCCCGCCGCGATGATTGCCGACATGCGCGCGATGCTGCTCGGCGAGCATCTGTCCGCTG CGTCGCGCCAGCATCTCACGGTCTGGCTCGTTGCCAACAAGACGGGCGACACACGGCTGCGCGCGGGCTTGCCGCCGGAC TGGCGCGTCGGCGACAAGACGGGCACGGGCGAACGGGGCACCTCGAACGATATCGCAATCGTCTGGCCTGCGGGACGGCC GCCCGTTCTCGTCGCGGTGTACCTGACGGGCGCGACGCAGACCAGCGCGGCGCAGCGCGATGCGGCGATCGCGAAAGTGG GGGCGCTGGTCGCGCATCTCTGA
Upstream 100 bases:
>100_bases CATGTTCGAGTCATAAGATTTTCTGGGTCATCGAGCAATTTATCATCGTTTGTCAGCCCGCCGGGGAGACGCGATAGTGG CGGCTCTTCAAGGAGGAGCA
Downstream 100 bases:
>100_bases ACGATCGCGGTCGAGGCGTAGCCCGACGCAGATCGCGTTACGCGTGTTGCGCACTGTGCCGCTCGTCATGTCGATTTCAT ATGCGACTTCGTGACACATA
Product: beta-lactamase
Products: NA
Alternate protein names: Penicillinase [H]
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MVTRRAFTIALGGGLAGIAVQAFGTAAAASAQGRAAHGGALDKRFAQIEAETGGRLGVAILDTANGQLQGWRARERFPMC STFKFLLASAVLMRKDQGKEQLGRRIVYAKDAVVANSPVSGPRAGGDGMTVSELCEAALTRSDNTAANLLLESIGGPPAL TVFARGIGDGVTRLDRNEPTLNEAIEGDPRDTTTPAAMIADMRAMLLGEHLSAASRQHLTVWLVANKTGDTRLRAGLPPD WRVGDKTGTGERGTSNDIAIVWPAGRPPVLVAVYLTGATQTSAAQRDAAIAKVGALVAHL
Sequences:
>Translated_300_residues MVTRRAFTIALGGGLAGIAVQAFGTAAAASAQGRAAHGGALDKRFAQIEAETGGRLGVAILDTANGQLQGWRARERFPMC STFKFLLASAVLMRKDQGKEQLGRRIVYAKDAVVANSPVSGPRAGGDGMTVSELCEAALTRSDNTAANLLLESIGGPPAL TVFARGIGDGVTRLDRNEPTLNEAIEGDPRDTTTPAAMIADMRAMLLGEHLSAASRQHLTVWLVANKTGDTRLRAGLPPD WRVGDKTGTGERGTSNDIAIVWPAGRPPVLVAVYLTGATQTSAAQRDAAIAKVGALVAHL >Mature_300_residues MVTRRAFTIALGGGLAGIAVQAFGTAAAASAQGRAAHGGALDKRFAQIEAETGGRLGVAILDTANGQLQGWRARERFPMC STFKFLLASAVLMRKDQGKEQLGRRIVYAKDAVVANSPVSGPRAGGDGMTVSELCEAALTRSDNTAANLLLESIGGPPAL TVFARGIGDGVTRLDRNEPTLNEAIEGDPRDTTTPAAMIADMRAMLLGEHLSAASRQHLTVWLVANKTGDTRLRAGLPPD WRVGDKTGTGERGTSNDIAIVWPAGRPPVLVAVYLTGATQTSAAQRDAAIAKVGALVAHL
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 31215; Mature: 31215
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRRAFTIALGGGLAGIAVQAFGTAAAASAQGRAAHGGALDKRFAQIEAETGGRLGVAI CCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCCEEEEEE LDTANGQLQGWRARERFPMCSTFKFLLASAVLMRKDQGKEQLGRRIVYAKDAVVANSPVS EECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCEEEECCCCC GPRAGGDGMTVSELCEAALTRSDNTAANLLLESIGGPPALTVFARGIGDGVTRLDRNEPT CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCCC LNEAIEGDPRDTTTPAAMIADMRAMLLGEHLSAASRQHLTVWLVANKTGDTRLRAGLPPD HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCC WRVGDKTGTGERGTSNDIAIVWPAGRPPVLVAVYLTGATQTSAAQRDAAIAKVGALVAHL CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTRRAFTIALGGGLAGIAVQAFGTAAAASAQGRAAHGGALDKRFAQIEAETGGRLGVAI CCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCCEEEEEE LDTANGQLQGWRARERFPMCSTFKFLLASAVLMRKDQGKEQLGRRIVYAKDAVVANSPVS EECCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCEEEECCCCC GPRAGGDGMTVSELCEAALTRSDNTAANLLLESIGGPPALTVFARGIGDGVTRLDRNEPT CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHCCCCCCC LNEAIEGDPRDTTTPAAMIADMRAMLLGEHLSAASRQHLTVWLVANKTGDTRLRAGLPPD HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECCCCCC WRVGDKTGTGERGTSNDIAIVWPAGRPPVLVAVYLTGATQTSAAQRDAAIAKVGALVAHL CCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1886608 [H]