Click here to switch to the map view.

The map label for this gene is ydcH [H]

Identifier: 186475928

GI number: 186475928

Start: 1304185

End: 1304406

Strand: Reverse

Name: ydcH [H]

Synonym: Bphy_1163

Alternate gene names: 186475928

Gene position: 1304406-1304185 (Counterclockwise)

Preceding gene: 186475929

Following gene: 186475927

Centisome position: 37.49

GC content: 55.86

Gene sequence:

>222_bases
ATGTTTCCTGAGTATCGCGATCTGATCTCGCGCCTGAAGAAAGAAGACGCGCATTTCGCGCGGCTTTTCGAGCGCCATAA
TGAACTCGACCACGAGATTCGCAACATGGAAACGGGTGTCGTGCCCGCCGACGGCCGCAGCATCGAAGTCCTCAAGAAAG
AAAAGCTGCGTCTCAAGGACAACCTGTACACGATCCTCAGGCAGGCGCAGACCTCGGCTTGA

Upstream 100 bases:

>100_bases
ATGATTAGTGATCCATAACAGTGTTCACGCATCCTCACGATGCGACAATGCACGCAAGCTTGAACCCAATCGCTTGACCG
TGACCATCTGAGGAGGTGCC

Downstream 100 bases:

>100_bases
CGTATGCCACATTGTGGGCCGCGCGGTGCGCGTCGATGAGTGACACGCGTCGCGTCGCGGCCCGTCCGGATTTCATCGTA
ATCGGGAGTTCATGAAGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MFPEYRDLISRLKKEDAHFARLFERHNELDHEIRNMETGVVPADGRSIEVLKKEKLRLKDNLYTILRQAQTSA

Sequences:

>Translated_73_residues
MFPEYRDLISRLKKEDAHFARLFERHNELDHEIRNMETGVVPADGRSIEVLKKEKLRLKDNLYTILRQAQTSA
>Mature_73_residues
MFPEYRDLISRLKKEDAHFARLFERHNELDHEIRNMETGVVPADGRSIEVLKKEKLRLKDNLYTILRQAQTSA

Specific function: Unknown

COG id: COG2841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081906, Length=72, Percent_Identity=52.7777777777778, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007420 [H]

Pfam domain/function: PF04325 DUF465 [H]

EC number: NA

Molecular weight: Translated: 8682; Mature: 8682

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPEYRDLISRLKKEDAHFARLFERHNELDHEIRNMETGVVPADGRSIEVLKKEKLRLKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
NLYTILRQAQTSA
HHHHHHHHHHCCC
>Mature Secondary Structure
MFPEYRDLISRLKKEDAHFARLFERHNELDHEIRNMETGVVPADGRSIEVLKKEKLRLKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
NLYTILRQAQTSA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2671655; 9097039; 9278503; 7567469 [H]