| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is glnP [H]
Identifier: 186475920
GI number: 186475920
Start: 1294690
End: 1295346
Strand: Reverse
Name: glnP [H]
Synonym: Bphy_1155
Alternate gene names: 186475920
Gene position: 1295346-1294690 (Counterclockwise)
Preceding gene: 186475921
Following gene: 186475919
Centisome position: 37.23
GC content: 62.25
Gene sequence:
>657_bases ATGCAGTTCGATCTGTCCGTCGTCGCCGATGCCTTGCCTGCGTTGCTGCAGGGCGCAAAGCTGACGGTGCTGATTACCGT GGTGGGCCTGGCGGGCGGCCTTGCCGTCGGGTTCCTGTTCGGCCTGATGCGCGCATACGGTAACGCCTTGATGCAAAAGA TCGCGTTCGTGTACGTGGAATTCGTGCGCGGCACGCCGATCGTCGTGCAGGTGATGTTCATTTACTTCGCGCTGCCCGTG CTGCTGAACGTGCGCGTTGATGCGATGACGGCGGCCGTCGTGTCGATCGTCGTCAACTCGGGCGCGTATATCGCGGAGAT CGTGCGCGGCGCATTTCTGTCGGTGCCGCGTGGCCTGAAGGAAGCGGGCCTCGCGCTCGGCATGCCGATGTGGCGCGTGC TCGCGTTCGTGATCGGCCCCGTCGCGATCCGGCGCATGACGCCTTCGCTCGGCAACCAGTTCATCGTGAGCCTGAAGGAT ACGTCGCTGTTCATCGTGATCGGCGTCGGCGAGTTGACGCGCCAGGGCCAGGAAATCATGGCCTCGAATTTTCGCGCGGT CGAAATCTGGACGGCCGTGGCCGCGATTTATCTGTGCATGATCGGCGTGCTGACATTCTGTCTGCGCACGATGGAAAAGA GGATGCGGATGCTATGA
Upstream 100 bases:
>100_bases CGAAGATCAAGGCTGACGGCCGTTACGCGGCGATCTACAAGAAGTGGTTCGGCGTCGAGCCGGCGAAGTCCTGAACAACA TCGGCAGCGGGAGAGTAGCC
Downstream 100 bases:
>100_bases GCGCGCTCGCGAACATGGTGGAATTCAGGAAAGTGACGAAACGCTTCGGGCAAACGACCGTGCTCGACGGCGTCGATCTC GACATCCGCGCGGGCGAGGT
Product: glutamine ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MQFDLSVVADALPALLQGAKLTVLITVVGLAGGLAVGFLFGLMRAYGNALMQKIAFVYVEFVRGTPIVVQVMFIYFALPV LLNVRVDAMTAAVVSIVVNSGAYIAEIVRGAFLSVPRGLKEAGLALGMPMWRVLAFVIGPVAIRRMTPSLGNQFIVSLKD TSLFIVIGVGELTRQGQEIMASNFRAVEIWTAVAAIYLCMIGVLTFCLRTMEKRMRML
Sequences:
>Translated_218_residues MQFDLSVVADALPALLQGAKLTVLITVVGLAGGLAVGFLFGLMRAYGNALMQKIAFVYVEFVRGTPIVVQVMFIYFALPV LLNVRVDAMTAAVVSIVVNSGAYIAEIVRGAFLSVPRGLKEAGLALGMPMWRVLAFVIGPVAIRRMTPSLGNQFIVSLKD TSLFIVIGVGELTRQGQEIMASNFRAVEIWTAVAAIYLCMIGVLTFCLRTMEKRMRML >Mature_218_residues MQFDLSVVADALPALLQGAKLTVLITVVGLAGGLAVGFLFGLMRAYGNALMQKIAFVYVEFVRGTPIVVQVMFIYFALPV LLNVRVDAMTAAVVSIVVNSGAYIAEIVRGAFLSVPRGLKEAGLALGMPMWRVLAFVIGPVAIRRMTPSLGNQFIVSLKD TSLFIVIGVGELTRQGQEIMASNFRAVEIWTAVAAIYLCMIGVLTFCLRTMEKRMRML
Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=219, Percent_Identity=60.7305936073059, Blast_Score=275, Evalue=2e-75, Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=34.7222222222222, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI87082239, Length=163, Percent_Identity=33.1288343558282, Blast_Score=94, Evalue=5e-21, Organism=Escherichia coli, GI1786873, Length=195, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1787086, Length=214, Percent_Identity=26.1682242990654, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786874, Length=215, Percent_Identity=22.7906976744186, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788646, Length=210, Percent_Identity=27.1428571428571, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=28.3185840707965, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=26.2135922330097, Blast_Score=74, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23623; Mature: 23623
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDLSVVADALPALLQGAKLTVLITVVGLAGGLAVGFLFGLMRAYGNALMQKIAFVYVE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVRGTPIVVQVMFIYFALPVLLNVRVDAMTAAVVSIVVNSGAYIAEIVRGAFLSVPRGLK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH EAGLALGMPMWRVLAFVIGPVAIRRMTPSLGNQFIVSLKDTSLFIVIGVGELTRQGQEIM HHHHHHCCHHHHHHHHHHHHHHHHHHCHHCCCCEEEEEECCEEEEEEECHHHHHHHHHHH ASNFRAVEIWTAVAAIYLCMIGVLTFCLRTMEKRMRML HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQFDLSVVADALPALLQGAKLTVLITVVGLAGGLAVGFLFGLMRAYGNALMQKIAFVYVE CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVRGTPIVVQVMFIYFALPVLLNVRVDAMTAAVVSIVVNSGAYIAEIVRGAFLSVPRGLK HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH EAGLALGMPMWRVLAFVIGPVAIRRMTPSLGNQFIVSLKDTSLFIVIGVGELTRQGQEIM HHHHHHCCHHHHHHHHHHHHHHHHHHCHHCCCCEEEEEECCEEEEEEECHHHHHHHHHHH ASNFRAVEIWTAVAAIYLCMIGVLTFCLRTMEKRMRML HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]