Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475901

Identifier: 186475901

GI number: 186475901

Start: 1278294

End: 1278740

Strand: Reverse

Name: 186475901

Synonym: Bphy_1136

Alternate gene names: NA

Gene position: 1278740-1278294 (Counterclockwise)

Preceding gene: 186475907

Following gene: 186475897

Centisome position: 36.75

GC content: 65.32

Gene sequence:

>447_bases
ATGTACGACCGGATCCTTGTCGCGCTCGACGATAGCGCCAGCGCAGAGATGGCGCTGCGCGAGGCGGTCAGGCTCGCGAA
ACAGTCCAGAGGCGTGGTGTATGCGCTGTCCGTGGTGGACCGTGGCCGATGGCCGGGGGAGGTGAGCGCACGGTTGGAGT
TCGAACGGGAGCTCCCTGCCGCGCCAAACGTTGCCACTCGCATGTTCGACGTGGCAACCGAACTGTTCCAGGAGTCGGGC
GTCACCGGGAAGACGCGGGCGATCGATGCATATGGCGAAAGCGTGTCGGAGGTAGTGGCACGCGCGGCCGAAGAATGCGA
TGCCGATATTATCGTGATCGGTACGCATGGAAGGCGCGGCGCGCAGCGGTTCTTGCTCGGCAGCGTCGCAGAGTCGCTCG
TGCGCTCGACGCAGCGGCCAGTTCTGCTACTCCGGCACGACGGCTAG

Upstream 100 bases:

>100_bases
TCGGTTGACCTGAGTCAACCGGCGAGCGGGGCGCCGTCACACACTGCCATTCATGCAACTTTCGCTGCCGTTCGAGGTAG
CCCACGTCTGGAGATGCACC

Downstream 100 bases:

>100_bases
GCGCACGCCAACGAGCGTGCCCGGTCGCGACGCGGCGTCTTGCCCGTGCGATTGCTGCTCGCACGCGATTCATCCCGCGC
TCTTTCCGAAGCGGCAATTT

Product: UspA domain-containing protein

Products: NA

Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Family Protein; Universal Stress Protein Family; Universal Stress Protein Uspa-Like Protein; Stress Response Protein; Universal Stress Protein UspA Family; Uspa Domain Protein; Transcriptional Regulator; Universal Stress; Universal Stress Protein Usp; Universelle Stress Protein; Universal Stress-Related Protein; Universal Stress Protein Uspa Family; UpsA Domain-Containing Protein; Universal Stress Protein Family Protein; Osmosensitive K+ Channel His Kinase Sensor

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPAAPNVATRMFDVATELFQESG
VTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRGAQRFLLGSVAESLVRSTQRPVLLLRHDG

Sequences:

>Translated_148_residues
MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPAAPNVATRMFDVATELFQESG
VTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRGAQRFLLGSVAESLVRSTQRPVLLLRHDG
>Mature_148_residues
MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPAAPNVATRMFDVATELFQESG
VTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRGAQRFLLGSVAESLVRSTQRPVLLLRHDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16144; Mature: 16144

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPA
CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCHHEEEECCCCCC
APNVATRMFDVATELFQESGVTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRG
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
AQRFLLGSVAESLVRSTQRPVLLLRHDG
HHHHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPA
CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCHHEEEECCCCCC
APNVATRMFDVATELFQESGVTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRG
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
AQRFLLGSVAESLVRSTQRPVLLLRHDG
HHHHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA