| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475895
Identifier: 186475895
GI number: 186475895
Start: 1273866
End: 1274480
Strand: Direct
Name: 186475895
Synonym: Bphy_1130
Alternate gene names: NA
Gene position: 1273866-1274480 (Clockwise)
Preceding gene: 186475883
Following gene: 186475898
Centisome position: 36.61
GC content: 63.9
Gene sequence:
>615_bases ATGATGAAAGCCTTGCTGATCATTCCCATCCTGTTTGCGCTGCATGCATTGGCCGGCTGCGGAATCGCCCCGTCGCTCCA CGCGGATGAGCAGGTGAAGGCAGCCTTCTCCGATGTCATCACGCGCTACGACGAACGCCTCGGACTGGCCGATGAGGCCA TCGCCCTCGCCCGCCACTATCTGCCCGCACAGGCATCGACATTCAAGGACATCGCCGACGCCCGTTCCGCCATCGAAGCC TTGCATGCGACACCCGCTCTCGTCGACGAGCGTGCGTTGTTCGAGCGCTTCGATGTCGCGCAACGTCAGATGACAGAGGC GATCTCGCAACTTCTCGTCGTGTGCGAATCCGTGCGCGGGCTCGACACGGCACCCCGCTTGCGGACGCTGCAGATGCGGC TTGCGTCGTCGGCGGCGCGCATCGCGGCTGCGCGAGCGCGCTACGACGAAGCGGCGCTCCAATACAACGCATCACTGCAT CGCTTTCCGTTCGATCTGGCTGCAGCCCTTCATGCCGATCAGGACAAACCCACTTTCTCCACCCAGGACCGCTCGCCTGT TCACCGGCATCCGCGCACGGACTTCGGTACGCTGCGCGGCTCGCTGCGTGTCTGA
Upstream 100 bases:
>100_bases GCGGTCCTCCGAAAACGTGCGGCGATTGACAGCGATCAATCCGTTATGTGCGAGGGCGTCTACGCTCGATCCGATAGCCC GGACATGGAGCACGATCGAC
Downstream 100 bases:
>100_bases CGGGCAAGCGAACGGCCATGCCGCTCTGTTTTCCGGCGCGGCGGACGGAACCCGTTGTTTAGACTCGATCTCGTCCGCTG TCAGCGTACGCAACACTGCC
Product: LemA family protein
Products: NA
Alternate protein names: Lipoprotein; Signal Peptide; LemA Protein; Extracellular Antigen Protein Lysteria LemA Protein; Extracellular Antigen Protein Lysteria LemA; LemA Conserved Protein
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHYLPAQASTFKDIADARSAIEA LHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRGLDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLH RFPFDLAAALHADQDKPTFSTQDRSPVHRHPRTDFGTLRGSLRV
Sequences:
>Translated_204_residues MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHYLPAQASTFKDIADARSAIEA LHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRGLDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLH RFPFDLAAALHADQDKPTFSTQDRSPVHRHPRTDFGTLRGSLRV >Mature_204_residues MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHYLPAQASTFKDIADARSAIEA LHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRGLDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLH RFPFDLAAALHADQDKPTFSTQDRSPVHRHPRTDFGTLRGSLRV
Specific function: Unknown
COG id: COG1704
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22442; Mature: 22442
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHY CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LPAQASTFKDIADARSAIEALHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRG CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLHRFPFDLAAALHADQDKPTFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCCCCCCC TQDRSPVHRHPRTDFGTLRGSLRV CCCCCCCCCCCCCCHHHHCCCCCC >Mature Secondary Structure MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHY CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LPAQASTFKDIADARSAIEALHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRG CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLHRFPFDLAAALHADQDKPTFS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCCCCCCC TQDRSPVHRHPRTDFGTLRGSLRV CCCCCCCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA