Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475880

Identifier: 186475880

GI number: 186475880

Start: 1261963

End: 1263702

Strand: Direct

Name: 186475880

Synonym: Bphy_1115

Alternate gene names: NA

Gene position: 1261963-1263702 (Clockwise)

Preceding gene: 186475879

Following gene: 186475883

Centisome position: 36.27

GC content: 64.25

Gene sequence:

>1740_bases
GTGACCCTACCGTTCAGACGCAGGCCGAGGAAGCGGCGCACCCGTTCGACGAACGTCAGCACACGGCATGGCGCGAACCG
CATTCGAGCCGCGCAACGCGAGGTTCGCGGAGTCGACTCGGCGATGCAGCGAGCGCGCATCTATCGCCACCCCGCTGGTT
CGATCGTCAGAATAGAAACGCATATCTCGATCGTCTATCTCGCGGGCCGCTTCGCTTACAAGATCATCAAGCCTGTCGCT
CCGGGATTCGCGGATTTCACGGCGGCCGACACGCGGCGGCACTGCTGCGAAGCCCAGGTACGTCTGAACAGACCGCTTGC
GCGGGGGCTTTATCTCGGCGTGCTTCCGATCAGGCGCCGCGGACGTTCGCTCATGCTCGAATCGAAGGGCCATACGGTCG
AATACGCGGTCAAGATGCGTCGCTTCGACGAATCCGGCCTCTTTTCCAGTCTCGCCCGACGGGGAGCGCTGTCGCCGCGC
GATATCGACCGTGCGACACAAAGACTTGCTGCCTGGCACGTACACGCGCCGCGAGACGCGCCTCTCGCACGGTACGGCGG
CGCCGCATTGCTCAGAGCACAGGTCGACGCCGTCAATGCATCCCTTCAGGCGAGGTGCAATGCGCCGGCTCTGCGTGATA
TCGGCGCCTGGTGCGCCCAGCAGCTCGCGCAGCTCGCGGACGCAATAGACAGGCGCCGTGTCGACGGCTTCGTACGTGCC
TGTCATGGCGACCTGCACCTCGACAACGTGATGCGCTGGCGCGGCGAGGTATCGATGTTCGACTGCATAGACTTCGACGA
CGCGCTGCGCTGGATCGATATGGCCAACGACATCGCGTTCCTCGTCATGGATCTGAGGGCGCGGGCAGGAACCCGCCTGT
CGAACCGGCTGCTGAACGGGTGGCTCGAGGCAACGGGCGACTACGCCGCACTCGAGCTGATGCCGCTCTATGTCGTGTAT
CGCGCGCTGGTTCGAGCGCTCGTGGCCTTTTTGTACAGTAAAAGCGCCTCGCACACGAAAGCCGCCGCAGCAGCGCGCGA
CGCCGCACGCTACCTGGAGATTGCCGCGGGCGAGACGCGAAAGCCGCCGCCCGTCCTGCTGCTGTGTCATGGCTTTTCGG
GATCGGGAAAATCCGTCGCCAGCCGCGCGCTGGCCGAGCTGAGCGGCGCGATATGTTTGTCCAGCGACGTCGAACGTAAG
CGCCTGGCGTCCACTCCCGCGGCACATGCCCGGCTCGACGGGGCGCACTATACGCGGGAGGCGCGACATGCCGTCTACGG
CCACTTGCTTCGCCTCGCCTCTTCGGTTGTACAGGCTGGCTACAGTGTCATCGTGGACGCGACGTTCCTTGAGCACGCCC
ATCGCCGCGACTTTTTCACGCTGGCGGAACGCCTTCGCGTAGAGGCTCGCGTGCTGGATTTTCACGCCGCTCCTCACATC
CTGGCGGAGCGCGTCGTCACACGTCAACGCGACCGTCGCGACGCCTCCGACGCCGACACGTCCACGCTGTCACTGCAACT
CAACACGGCCGAGCCGCTGACATCCGACGAAATGGCGCGGACCCTCGCCTTCGATACCATCGTTCCCGTCGAGGCCTTCG
ACGGCCCAGACTTCTGGAAACGGGTACTTGATCTGATGTCTTCGCCTGTCGCCGAACCCGCGCCCGATATCTGCCGCATC
AGGTGCAAAAGCGAAAATAGCCGCTATGCAGCAGAACAGGATTCCCGCCCAACTCGTTGA

Upstream 100 bases:

>100_bases
ATCCGGCGCTGTGCAGCTTCTGGCGGGACGTCGAGGACGCGGCGTCGAGCATGCCCGTCAGGCAGGATAAAGACAGGCCG
ACCCGTCGCAGGAGGCACGC

Downstream 100 bases:

>100_bases
GCATCCGCCGGGCGGCAACCTCGATGTCCGGACGATGTTCAGTGAACGCGTCGCACAGGTCTTCTTCTCGCAGCGAGCGC
GCACCGAAATGGTCTTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MTLPFRRRPRKRRTRSTNVSTRHGANRIRAAQREVRGVDSAMQRARIYRHPAGSIVRIETHISIVYLAGRFAYKIIKPVA
PGFADFTAADTRRHCCEAQVRLNRPLARGLYLGVLPIRRRGRSLMLESKGHTVEYAVKMRRFDESGLFSSLARRGALSPR
DIDRATQRLAAWHVHAPRDAPLARYGGAALLRAQVDAVNASLQARCNAPALRDIGAWCAQQLAQLADAIDRRRVDGFVRA
CHGDLHLDNVMRWRGEVSMFDCIDFDDALRWIDMANDIAFLVMDLRARAGTRLSNRLLNGWLEATGDYAALELMPLYVVY
RALVRALVAFLYSKSASHTKAAAAARDAARYLEIAAGETRKPPPVLLLCHGFSGSGKSVASRALAELSGAICLSSDVERK
RLASTPAAHARLDGAHYTREARHAVYGHLLRLASSVVQAGYSVIVDATFLEHAHRRDFFTLAERLRVEARVLDFHAAPHI
LAERVVTRQRDRRDASDADTSTLSLQLNTAEPLTSDEMARTLAFDTIVPVEAFDGPDFWKRVLDLMSSPVAEPAPDICRI
RCKSENSRYAAEQDSRPTR

Sequences:

>Translated_579_residues
MTLPFRRRPRKRRTRSTNVSTRHGANRIRAAQREVRGVDSAMQRARIYRHPAGSIVRIETHISIVYLAGRFAYKIIKPVA
PGFADFTAADTRRHCCEAQVRLNRPLARGLYLGVLPIRRRGRSLMLESKGHTVEYAVKMRRFDESGLFSSLARRGALSPR
DIDRATQRLAAWHVHAPRDAPLARYGGAALLRAQVDAVNASLQARCNAPALRDIGAWCAQQLAQLADAIDRRRVDGFVRA
CHGDLHLDNVMRWRGEVSMFDCIDFDDALRWIDMANDIAFLVMDLRARAGTRLSNRLLNGWLEATGDYAALELMPLYVVY
RALVRALVAFLYSKSASHTKAAAAARDAARYLEIAAGETRKPPPVLLLCHGFSGSGKSVASRALAELSGAICLSSDVERK
RLASTPAAHARLDGAHYTREARHAVYGHLLRLASSVVQAGYSVIVDATFLEHAHRRDFFTLAERLRVEARVLDFHAAPHI
LAERVVTRQRDRRDASDADTSTLSLQLNTAEPLTSDEMARTLAFDTIVPVEAFDGPDFWKRVLDLMSSPVAEPAPDICRI
RCKSENSRYAAEQDSRPTR
>Mature_578_residues
TLPFRRRPRKRRTRSTNVSTRHGANRIRAAQREVRGVDSAMQRARIYRHPAGSIVRIETHISIVYLAGRFAYKIIKPVAP
GFADFTAADTRRHCCEAQVRLNRPLARGLYLGVLPIRRRGRSLMLESKGHTVEYAVKMRRFDESGLFSSLARRGALSPRD
IDRATQRLAAWHVHAPRDAPLARYGGAALLRAQVDAVNASLQARCNAPALRDIGAWCAQQLAQLADAIDRRRVDGFVRAC
HGDLHLDNVMRWRGEVSMFDCIDFDDALRWIDMANDIAFLVMDLRARAGTRLSNRLLNGWLEATGDYAALELMPLYVVYR
ALVRALVAFLYSKSASHTKAAAAARDAARYLEIAAGETRKPPPVLLLCHGFSGSGKSVASRALAELSGAICLSSDVERKR
LASTPAAHARLDGAHYTREARHAVYGHLLRLASSVVQAGYSVIVDATFLEHAHRRDFFTLAERLRVEARVLDFHAAPHIL
AERVVTRQRDRRDASDADTSTLSLQLNTAEPLTSDEMARTLAFDTIVPVEAFDGPDFWKRVLDLMSSPVAEPAPDICRIR
CKSENSRYAAEQDSRPTR

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 64612; Mature: 64480

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPFRRRPRKRRTRSTNVSTRHGANRIRAAQREVRGVDSAMQRARIYRHPAGSIVRIET
CCCCCCCCCHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
HISIVYLAGRFAYKIIKPVAPGFADFTAADTRRHCCEAQVRLNRPLARGLYLGVLPIRRR
EEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHC
GRSLMLESKGHTVEYAVKMRRFDESGLFSSLARRGALSPRDIDRATQRLAAWHVHAPRDA
CCEEEEECCCCEEHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
PLARYGGAALLRAQVDAVNASLQARCNAPALRDIGAWCAQQLAQLADAIDRRRVDGFVRA
CHHHHCCHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CHGDLHLDNVMRWRGEVSMFDCIDFDDALRWIDMANDIAFLVMDLRARAGTRLSNRLLNG
HCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WLEATGDYAALELMPLYVVYRALVRALVAFLYSKSASHTKAAAAARDAARYLEIAAGETR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
KPPPVLLLCHGFSGSGKSVASRALAELSGAICLSSDVERKRLASTPAAHARLDGAHYTRE
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCHHHHHHHCCCHHHHHCCCHHHHHH
ARHAVYGHLLRLASSVVQAGYSVIVDATFLEHAHRRDFFTLAERLRVEARVLDFHAAPHI
HHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LAERVVTRQRDRRDASDADTSTLSLQLNTAEPLTSDEMARTLAFDTIVPVEAFDGPDFWK
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
RVLDLMSSPVAEPAPDICRIRCKSENSRYAAEQDSRPTR
HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLPFRRRPRKRRTRSTNVSTRHGANRIRAAQREVRGVDSAMQRARIYRHPAGSIVRIET
CCCCCCCCHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
HISIVYLAGRFAYKIIKPVAPGFADFTAADTRRHCCEAQVRLNRPLARGLYLGVLPIRRR
EEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHC
GRSLMLESKGHTVEYAVKMRRFDESGLFSSLARRGALSPRDIDRATQRLAAWHVHAPRDA
CCEEEEECCCCEEHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
PLARYGGAALLRAQVDAVNASLQARCNAPALRDIGAWCAQQLAQLADAIDRRRVDGFVRA
CHHHHCCHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CHGDLHLDNVMRWRGEVSMFDCIDFDDALRWIDMANDIAFLVMDLRARAGTRLSNRLLNG
HCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WLEATGDYAALELMPLYVVYRALVRALVAFLYSKSASHTKAAAAARDAARYLEIAAGETR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
KPPPVLLLCHGFSGSGKSVASRALAELSGAICLSSDVERKRLASTPAAHARLDGAHYTRE
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCHHHHHHHCCCHHHHHCCCHHHHHH
ARHAVYGHLLRLASSVVQAGYSVIVDATFLEHAHRRDFFTLAERLRVEARVLDFHAAPHI
HHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LAERVVTRQRDRRDASDADTSTLSLQLNTAEPLTSDEMARTLAFDTIVPVEAFDGPDFWK
HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
RVLDLMSSPVAEPAPDICRIRCKSENSRYAAEQDSRPTR
HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]