| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475861
Identifier: 186475861
GI number: 186475861
Start: 1237292
End: 1237558
Strand: Direct
Name: 186475861
Synonym: Bphy_1096
Alternate gene names: NA
Gene position: 1237292-1237558 (Clockwise)
Preceding gene: 186475860
Following gene: 186475862
Centisome position: 35.56
GC content: 60.3
Gene sequence:
>267_bases ATGTCATCTGCCGCCGTTGCACCCATGTCTTCTGAGAACGTTTGCGAGCGCGTGTGCAACGTCGCCTGCGAACGCCCGAC AAAGCCCGAGGCGACCGTGCTTTCCGACGACACCATCCTCGCTATCGCCCGTCGCGCAGGAATGCTCGTGATGCTCGACG GACGGATCGGACGCGAAACGTACCAAAGTGTGACAGGCTCGGTGTCGTCCCTCCATCGCTTCGTAGCCGATATGTACAAC CTGATCCTTGACGGCGCGTCGCGATAA
Upstream 100 bases:
>100_bases CCGCGACCAGCGATACTGAAAACATACATTCCAGGTCTAATCGGGTGCGCTGGAATAGAACGCACGTGCGCACTGAGCAT GGCCTGTTGGGAGAACGATC
Downstream 100 bases:
>100_bases CCGCCGTCGAGTCGGGTGCGCATTCATCATGTCGATGCGAGCGCACTTCTTCATCGCGATTGACGCATATCAATAGCTCG CAGTTGGCCTGCACCAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSSAAVAPMSSENVCERVCNVACERPTKPEATVLSDDTILAIARRAGMLVMLDGRIGRETYQSVTGSVSSLHRFVADMYN LILDGASR
Sequences:
>Translated_88_residues MSSAAVAPMSSENVCERVCNVACERPTKPEATVLSDDTILAIARRAGMLVMLDGRIGRETYQSVTGSVSSLHRFVADMYN LILDGASR >Mature_87_residues SSAAVAPMSSENVCERVCNVACERPTKPEATVLSDDTILAIARRAGMLVMLDGRIGRETYQSVTGSVSSLHRFVADMYNL ILDGASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9464; Mature: 9333
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAAVAPMSSENVCERVCNVACERPTKPEATVLSDDTILAIARRAGMLVMLDGRIGRET CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCEEEEECCCCCHHH YQSVTGSVSSLHRFVADMYNLILDGASR HHHHHCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSAAVAPMSSENVCERVCNVACERPTKPEATVLSDDTILAIARRAGMLVMLDGRIGRET CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCEEEEECCCCCHHH YQSVTGSVSSLHRFVADMYNLILDGASR HHHHHCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA