| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475860
Identifier: 186475860
GI number: 186475860
Start: 1236267
End: 1237094
Strand: Direct
Name: 186475860
Synonym: Bphy_1095
Alternate gene names: NA
Gene position: 1236267-1237094 (Clockwise)
Preceding gene: 186475855
Following gene: 186475861
Centisome position: 35.53
GC content: 59.54
Gene sequence:
>828_bases GTGCGCGGTTTGATCGAAAGTCCAACCTATCTCCAGGCCGACGAGGACCTCGCGTTTCTGAGACGTCCCGAGATGTGCGG CGTGCGTTTGCAACTCGACTATTGGAAAACGGAGGAGTCACTGCAGCGCCATACGATCCACCACACCATAGTCGTGTACG GCAGCACCCGTATACCCGCGCCCTCTGTCGCGCGCCAGCGAATCCGGCACGCCCGGCGACTGCTGCGAGAAAACTGCGAC GAAACGGGCGGACACGAAGCGCTGAATGTAGCGAAAGCCCAGCTTCAACGAAGCCGCTACTATGACGTAGCGCGAGAATT AGGCCGCATTGCAGGTACCGCACAATGCGGCGGCGTACTGTCGTGCCTTGCGCTCGTGACGGGTGGCGGTCCGGGAATCA TGGAAGCGGCAAACCGGGGCGCTTACGATTGCGGCGCGCCGAGCATCGGCCTGAATATTTCCTTGCCGCGCGACCAGGAG CCCAATCCCTACATCACACCAGAACTCTGCTTCAGGCTGCATTACTTCGCCATCCGCAAGCTCCATCTGCTGGAACGGGC ACGCGCGGCTGTGTTCTTTCCTGGTGGATTCGGCACGTGCGACGAACTGTTCGAAGTCTTGACGCTGCTGCAAACGCAGA AAATCAAGCCTTTGCCTGTCGTCCTCGTCGGCGAGTCGTACTGGAGGCGCGCGATCGACTTCGACTTCATGATCAGCGAG GGAATGATCTCTCCGGACGACATGCGGCTGTTTGTGTTTCGTGAGACGGCTGAAGCCGTATGGGACGCGATCGTCCACTG GTACGAAAGTCACGAAACCGCACCATGA
Upstream 100 bases:
>100_bases ACATCACGACAGCGCGTCCATCGAGATGGAGTCGGACGTCGAGTCGCAACGTTTCCAGCCGCGCGACGATGGGCACGGTA CAACAGGACGCGCTTCGCGC
Downstream 100 bases:
>100_bases AGGCCGGTCACACCAGACACCGTTCCCCTAGGAAAATTCCGATGGCTCGGCGTCACATCCCTAACCGATGTTCATCCCGT GCTGATACCCGTTCCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MRGLIESPTYLQADEDLAFLRRPEMCGVRLQLDYWKTEESLQRHTIHHTIVVYGSTRIPAPSVARQRIRHARRLLRENCD ETGGHEALNVAKAQLQRSRYYDVARELGRIAGTAQCGGVLSCLALVTGGGPGIMEAANRGAYDCGAPSIGLNISLPRDQE PNPYITPELCFRLHYFAIRKLHLLERARAAVFFPGGFGTCDELFEVLTLLQTQKIKPLPVVLVGESYWRRAIDFDFMISE GMISPDDMRLFVFRETAEAVWDAIVHWYESHETAP
Sequences:
>Translated_275_residues MRGLIESPTYLQADEDLAFLRRPEMCGVRLQLDYWKTEESLQRHTIHHTIVVYGSTRIPAPSVARQRIRHARRLLRENCD ETGGHEALNVAKAQLQRSRYYDVARELGRIAGTAQCGGVLSCLALVTGGGPGIMEAANRGAYDCGAPSIGLNISLPRDQE PNPYITPELCFRLHYFAIRKLHLLERARAAVFFPGGFGTCDELFEVLTLLQTQKIKPLPVVLVGESYWRRAIDFDFMISE GMISPDDMRLFVFRETAEAVWDAIVHWYESHETAP >Mature_275_residues MRGLIESPTYLQADEDLAFLRRPEMCGVRLQLDYWKTEESLQRHTIHHTIVVYGSTRIPAPSVARQRIRHARRLLRENCD ETGGHEALNVAKAQLQRSRYYDVARELGRIAGTAQCGGVLSCLALVTGGGPGIMEAANRGAYDCGAPSIGLNISLPRDQE PNPYITPELCFRLHYFAIRKLHLLERARAAVFFPGGFGTCDELFEVLTLLQTQKIKPLPVVLVGESYWRRAIDFDFMISE GMISPDDMRLFVFRETAEAVWDAIVHWYESHETAP
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31089; Mature: 31089
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLIESPTYLQADEDLAFLRRPEMCGVRLQLDYWKTEESLQRHTIHHTIVVYGSTRIPA CCCCCCCCCEEECCCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHEEEEEEEECCCCCC PSVARQRIRHARRLLRENCDETGGHEALNVAKAQLQRSRYYDVARELGRIAGTAQCGGVL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SCLALVTGGGPGIMEAANRGAYDCGAPSIGLNISLPRDQEPNPYITPELCFRLHYFAIRK HHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH LHLLERARAAVFFPGGFGTCDELFEVLTLLQTQKIKPLPVVLVGESYWRRAIDFDFMISE HHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCHHEEECC GMISPDDMRLFVFRETAEAVWDAIVHWYESHETAP CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRGLIESPTYLQADEDLAFLRRPEMCGVRLQLDYWKTEESLQRHTIHHTIVVYGSTRIPA CCCCCCCCCEEECCCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHEEEEEEEECCCCCC PSVARQRIRHARRLLRENCDETGGHEALNVAKAQLQRSRYYDVARELGRIAGTAQCGGVL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SCLALVTGGGPGIMEAANRGAYDCGAPSIGLNISLPRDQEPNPYITPELCFRLHYFAIRK HHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH LHLLERARAAVFFPGGFGTCDELFEVLTLLQTQKIKPLPVVLVGESYWRRAIDFDFMISE HHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCHHEEECC GMISPDDMRLFVFRETAEAVWDAIVHWYESHETAP CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA