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The map label for this gene is yncB [H]

Identifier: 186475802

GI number: 186475802

Start: 1166520

End: 1167518

Strand: Direct

Name: yncB [H]

Synonym: Bphy_1037

Alternate gene names: 186475802

Gene position: 1166520-1167518 (Clockwise)

Preceding gene: 186475801

Following gene: 186475803

Centisome position: 33.53

GC content: 63.86

Gene sequence:

>999_bases
ATGAGCCAACTCAATCGCCAGATTCTGCTTGCATCGCGTCCGCAGGGCGCAGCATCCGCCGACAACTTCAAGCTCGTCGA
AACGCCGCTCGCGCCGCTCGCCGAGGGCGAAGTGCGGGTGCGCAATCATTACTTGTCGCTGGATCCATACATGCGCGGCC
GCATGAGCGATGCCAGGTCGTACGCGGCGCCGCAACCGTTGAATGAAGTGATGATTGGCGGCACGGCGGGCGAGGTGGTC
GAGTCGAAGAACGCGGCGTTCAAGCCCGGCGACAAAGTGGTCGGCATGTCGGGCTGGCAGGAGTTCGGCACGTCAGACGG
CAAGGGCCTGCAAAAAGTCGACGACACACATGTGCCGCTGTCCGCCTATCTCGGCCCCGTCGGCATGCCTGGCGTCACGG
CCTGGTACGGTCTGAACAACATCATCGCTCCGAAGGCGGGTGAAACGGTCGTCGTCAGCGCAGCGAGCGGCGCTGTCGGC
AGCGTGGTCGGGCAACTGGCGAAGCAGGCGGGCGCACGGGCTGTCGGCATCGCGGGCGGCTCCGAGAAATGCCGCTATGT
CGTCGAGACGCTGGGCTTCGATGCCTGTGTCGACTACAAGGCGGGCAATCTCTATCAGGATCTGAAGGCGGCAACGCCGG
ACGGTGTCGACGGCTGCTTCGAGAACGTCGGCGGCGAGGGGCTCGATGCCACGCTGGCGCGGATGAATGCCCATGGCCGC
ATTGCGCTGTGCGGCTTCATCGCCGGATACGACGGCGCGCCCATACCGCTCAGGCACCCCGCGTTGCTGCTCACCCAGCG
TCTGCTCGTGCAGGGTTTCATCGTCACCGAACATATGGACGTCTGGCCTCGCGCGCTGAAGGAACTCGGTACGCTCGTCG
CGCAAAAGAAACTGCACTATCGCGAGACCATTGCCCAAGGTCTGGAGCATGCACCTGAAGCGTTCCTCGGCATGCTCAAG
GGGCGCAATTTCGGCAAGCAGCTGGTCAAGCTGATCTGA

Upstream 100 bases:

>100_bases
CAGCGATCCATCGGCGAAGCCGGGACCGAGCGACGCTTGAGCGCTCGCAGTTCCAGCCACCGCATTCGCGCTGGTTCGCA
TCTTCCGGAGACACACCGTC

Downstream 100 bases:

>100_bases
ACCGGCGCATGGCGGGCCAGCCCAAGCAATCCAACGAAGGAAACGGCATGTTCGAATTCGACGGCAAGGTCGCGGTGATA
ACAGGCGCGGGAAGCGGCTT

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MSQLNRQILLASRPQGAASADNFKLVETPLAPLAEGEVRVRNHYLSLDPYMRGRMSDARSYAAPQPLNEVMIGGTAGEVV
ESKNAAFKPGDKVVGMSGWQEFGTSDGKGLQKVDDTHVPLSAYLGPVGMPGVTAWYGLNNIIAPKAGETVVVSAASGAVG
SVVGQLAKQAGARAVGIAGGSEKCRYVVETLGFDACVDYKAGNLYQDLKAATPDGVDGCFENVGGEGLDATLARMNAHGR
IALCGFIAGYDGAPIPLRHPALLLTQRLLVQGFIVTEHMDVWPRALKELGTLVAQKKLHYRETIAQGLEHAPEAFLGMLK
GRNFGKQLVKLI

Sequences:

>Translated_332_residues
MSQLNRQILLASRPQGAASADNFKLVETPLAPLAEGEVRVRNHYLSLDPYMRGRMSDARSYAAPQPLNEVMIGGTAGEVV
ESKNAAFKPGDKVVGMSGWQEFGTSDGKGLQKVDDTHVPLSAYLGPVGMPGVTAWYGLNNIIAPKAGETVVVSAASGAVG
SVVGQLAKQAGARAVGIAGGSEKCRYVVETLGFDACVDYKAGNLYQDLKAATPDGVDGCFENVGGEGLDATLARMNAHGR
IALCGFIAGYDGAPIPLRHPALLLTQRLLVQGFIVTEHMDVWPRALKELGTLVAQKKLHYRETIAQGLEHAPEAFLGMLK
GRNFGKQLVKLI
>Mature_331_residues
SQLNRQILLASRPQGAASADNFKLVETPLAPLAEGEVRVRNHYLSLDPYMRGRMSDARSYAAPQPLNEVMIGGTAGEVVE
SKNAAFKPGDKVVGMSGWQEFGTSDGKGLQKVDDTHVPLSAYLGPVGMPGVTAWYGLNNIIAPKAGETVVVSAASGAVGS
VVGQLAKQAGARAVGIAGGSEKCRYVVETLGFDACVDYKAGNLYQDLKAATPDGVDGCFENVGGEGLDATLARMNAHGRI
ALCGFIAGYDGAPIPLRHPALLLTQRLLVQGFIVTEHMDVWPRALKELGTLVAQKKLHYRETIAQGLEHAPEAFLGMLKG
RNFGKQLVKLI

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=325, Percent_Identity=43.3846153846154, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI226059133, Length=325, Percent_Identity=43.3846153846154, Blast_Score=225, Evalue=4e-59,
Organism=Homo sapiens, GI226246682, Length=343, Percent_Identity=38.7755102040816, Blast_Score=205, Evalue=4e-53,
Organism=Homo sapiens, GI226246680, Length=343, Percent_Identity=38.7755102040816, Blast_Score=205, Evalue=4e-53,
Organism=Homo sapiens, GI22748929, Length=343, Percent_Identity=38.7755102040816, Blast_Score=205, Evalue=4e-53,
Organism=Homo sapiens, GI226056130, Length=297, Percent_Identity=41.7508417508418, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI28557745, Length=214, Percent_Identity=31.7757009345794, Blast_Score=89, Evalue=6e-18,
Organism=Escherichia coli, GI226510941, Length=336, Percent_Identity=47.0238095238095, Blast_Score=304, Evalue=6e-84,
Organism=Caenorhabditis elegans, GI133901710, Length=351, Percent_Identity=30.7692307692308, Blast_Score=156, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI133901712, Length=351, Percent_Identity=30.7692307692308, Blast_Score=156, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6323504, Length=336, Percent_Identity=31.25, Blast_Score=132, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35182; Mature: 35051

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLNRQILLASRPQGAASADNFKLVETPLAPLAEGEVRVRNHYLSLDPYMRGRMSDARS
CCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHH
YAAPQPLNEVMIGGTAGEVVESKNAAFKPGDKVVGMSGWQEFGTSDGKGLQKVDDTHVPL
CCCCCCHHHEEECCCHHHHHHCCCCCCCCCCCEECCCCHHHHCCCCCCCCHHCCCCCCCH
SAYLGPVGMPGVTAWYGLNNIIAPKAGETVVVSAASGAVGSVVGQLAKQAGARAVGIAGG
HHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEECCC
SEKCRYVVETLGFDACVDYKAGNLYQDLKAATPDGVDGCFENVGGEGLDATLARMNAHGR
CHHHHHHHHHCCCHHEECCCCCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCC
IALCGFIAGYDGAPIPLRHPALLLTQRLLVQGFIVTEHMDVWPRALKELGTLVAQKKLHY
EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RETIAQGLEHAPEAFLGMLKGRNFGKQLVKLI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
>Mature Secondary Structure 
SQLNRQILLASRPQGAASADNFKLVETPLAPLAEGEVRVRNHYLSLDPYMRGRMSDARS
CCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHH
YAAPQPLNEVMIGGTAGEVVESKNAAFKPGDKVVGMSGWQEFGTSDGKGLQKVDDTHVPL
CCCCCCHHHEEECCCHHHHHHCCCCCCCCCCCEECCCCHHHHCCCCCCCCHHCCCCCCCH
SAYLGPVGMPGVTAWYGLNNIIAPKAGETVVVSAASGAVGSVVGQLAKQAGARAVGIAGG
HHHHCCCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEECCC
SEKCRYVVETLGFDACVDYKAGNLYQDLKAATPDGVDGCFENVGGEGLDATLARMNAHGR
CHHHHHHHHHCCCHHEECCCCCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCC
IALCGFIAGYDGAPIPLRHPALLLTQRLLVQGFIVTEHMDVWPRALKELGTLVAQKKLHY
EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RETIAQGLEHAPEAFLGMLKGRNFGKQLVKLI
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]