| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475797
Identifier: 186475797
GI number: 186475797
Start: 1163098
End: 1163877
Strand: Direct
Name: 186475797
Synonym: Bphy_1032
Alternate gene names: NA
Gene position: 1163098-1163877 (Clockwise)
Preceding gene: 186475795
Following gene: 186475799
Centisome position: 33.43
GC content: 73.33
Gene sequence:
>780_bases ATGCGAATGCGGGTTGCATGCGCGGCGGTTGCGGGGGCACTGACGATGGCATCGGGTGCGGCGTCGGCGCAAACGGAGGC TTATACCAGCACGCCTGTCTATCTGTACGCAGGCCCAGCGCAGGACTACCCGATCGTCGCGCAGCTTCCGGCCGGGCAGC CGGTGACCGTCTACGGCTGCGTGAGCGGTTATACGTGGTGCGACGTGGCCATTCCGCAAGCGCGCGGCTGGGTGTACGGC GGCGATCTGGCGTATCCGTATCAAGGCAGCAATGTGCCCGTCATGACCTACGGCACGGCGCTCGGCTTGCCGCTGATCAC GTTCTCGCTCGGCACGTACTGGGGACATTACTATCGCGAGCGTCCATGGTATCCGGACCGCTCGCGTTGGGAGCATCATG CGCCGCCGCCGAACCGGCCACTGCCGCCGGGGCATCCTCCGCCGCCACAGGGCGCCAACCGGCCGCCGCCCGCATCGCCG CGGCCTGAGCCCGCACCGCAGCCGCCCGGCGCCGAACACGGGCATCGACCGGGGCCGCCGCAGCCGCCGCCCGGTCAGCG CGGCGAGCCGCAGCCGGGCCAGGGCGCGCGCCCACCCGGTCCGCCGCCGGGGCAAATGGGTGCACCTGCGCCGGGCCACG CCCCCGCTCAAGGCGGTCGGCCACCCGGGCCGCCTGCGGCGCCGCCGCCCGCCCGTCCGGCGGGCCCGCCACCAGCGCAT GGCGGCAATAGCGCGCCGAGGCCGCCCGAGCCGCCGGGACCAGGCAACGCAAATCATTGA
Upstream 100 bases:
>100_bases CCCGGCGCAGGCGGGCCGCCGGGCACAGGATTCGCTGGCAGGTGTTAGCGTTGAGGTGCTTGCGTCGGCTACGGGGCCAC GAAGCGAACAGGAGATCACG
Downstream 100 bases:
>100_bases CGGGTGGCGTTTGCCGCGTCACATAACCGGCGATGGGCCGGCTGTCGCTACAGACCGCCGACCTCGCCCGCCGGCAGCGA CAGCGTGCCCTGATCGATGA
Product: SH3 type 3 domain-containing protein
Products: NA
Alternate protein names: SH3 Type 3 Domain-Containing Protein; SH3-Like Region; SH3 Domain-Containing Protein; Secreted Protein
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRMRVACAAVAGALTMASGAASAQTEAYTSTPVYLYAGPAQDYPIVAQLPAGQPVTVYGCVSGYTWCDVAIPQARGWVYG GDLAYPYQGSNVPVMTYGTALGLPLITFSLGTYWGHYYRERPWYPDRSRWEHHAPPPNRPLPPGHPPPPQGANRPPPASP RPEPAPQPPGAEHGHRPGPPQPPPGQRGEPQPGQGARPPGPPPGQMGAPAPGHAPAQGGRPPGPPAAPPPARPAGPPPAH GGNSAPRPPEPPGPGNANH
Sequences:
>Translated_259_residues MRMRVACAAVAGALTMASGAASAQTEAYTSTPVYLYAGPAQDYPIVAQLPAGQPVTVYGCVSGYTWCDVAIPQARGWVYG GDLAYPYQGSNVPVMTYGTALGLPLITFSLGTYWGHYYRERPWYPDRSRWEHHAPPPNRPLPPGHPPPPQGANRPPPASP RPEPAPQPPGAEHGHRPGPPQPPPGQRGEPQPGQGARPPGPPPGQMGAPAPGHAPAQGGRPPGPPAAPPPARPAGPPPAH GGNSAPRPPEPPGPGNANH >Mature_259_residues MRMRVACAAVAGALTMASGAASAQTEAYTSTPVYLYAGPAQDYPIVAQLPAGQPVTVYGCVSGYTWCDVAIPQARGWVYG GDLAYPYQGSNVPVMTYGTALGLPLITFSLGTYWGHYYRERPWYPDRSRWEHHAPPPNRPLPPGHPPPPQGANRPPPASP RPEPAPQPPGAEHGHRPGPPQPPPGQRGEPQPGQGARPPGPPPGQMGAPAPGHAPAQGGRPPGPPAAPPPARPAGPPPAH GGNSAPRPPEPPGPGNANH
Specific function: Unknown
COG id: COG4991
COG function: function code S; Uncharacterized protein with a bacterial SH3 domain homologue
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26768; Mature: 26768
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMRVACAAVAGALTMASGAASAQTEAYTSTPVYLYAGPAQDYPIVAQLPAGQPVTVYGC CCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEECCCCCCCEEEECCCCCCEEEEEC VSGYTWCDVAIPQARGWVYGGDLAYPYQGSNVPVMTYGTALGLPLITFSLGTYWGHYYRE CCCCEEEEEECCCCCCEEECCCEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHC RPWYPDRSRWEHHAPPPNRPLPPGHPPPPQGANRPPPASPRPEPAPQPPGAEHGHRPGPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPPPGQRGEPQPGQGARPPGPPPGQMGAPAPGHAPAQGGRPPGPPAAPPPARPAGPPPAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGNSAPRPPEPPGPGNANH CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRMRVACAAVAGALTMASGAASAQTEAYTSTPVYLYAGPAQDYPIVAQLPAGQPVTVYGC CCCCHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEECCCCCCCEEEECCCCCCEEEEEC VSGYTWCDVAIPQARGWVYGGDLAYPYQGSNVPVMTYGTALGLPLITFSLGTYWGHYYRE CCCCEEEEEECCCCCCEEECCCEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHC RPWYPDRSRWEHHAPPPNRPLPPGHPPPPQGANRPPPASPRPEPAPQPPGAEHGHRPGPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPPPGQRGEPQPGQGARPPGPPPGQMGAPAPGHAPAQGGRPPGPPAAPPPARPAGPPPAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGNSAPRPPEPPGPGNANH CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA