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The map label for this gene is crtB [H]

Identifier: 186475771

GI number: 186475771

Start: 1127503

End: 1128411

Strand: Reverse

Name: crtB [H]

Synonym: Bphy_1006

Alternate gene names: 186475771

Gene position: 1128411-1127503 (Counterclockwise)

Preceding gene: 186475772

Following gene: 186475768

Centisome position: 32.43

GC content: 65.79

Gene sequence:

>909_bases
ATGCTACAATTTTCGGTCTTTCGTGCACACCTCACGCACAGCCGTGCGCGGCTCCTTTCCCCACAAGCCAATCCCGTGAA
TTTCGACGAATATTGCCAGCAGAAAGCAGCGCCCCCCGGTTCGAGCACTTACTACGCGTTGCGTCAGGCGCCCGTCGCGC
GGCAGCCGCTGCTCACCGCGCTGTTCGCACTGCGTCGCGAGTTCGAAGAGACGGTGAAGGAAACGACGGACCCGACCATC
GGCCGCACGAAGCTGGCGTGGTGGCAAAAGGAAGCAGCGGCGCTCGCGGCCGGCGAGCCGACGCACCCCGTCTCGCAGGC
ACTCGCCGCGCATTTGCCCGACGTGCAGGCGGAGTATCCCGCGCTGCAGGGCATAATCGCGGGGTTCGAGATGGATCTCG
ACCAGGCGCGCTATCTTGACTATCCGAACTTACGGCGCTACATGGCGGGCGTCGGCGGCACCTTCGCGTCCGTCGTCGCC
CGCGCAACGGCGCACGAGCCGTCGCAGGCGGCGTCGTGGGCTGCGCCGCTCGGCGAAGCGTTGATGCTCGCGCAGATCGT
CGTGGAGCTCGGCAACGACGCGCGGCACGGACGCATCTACATCCCCATCGACGAGATGCAGCGCTTCAACGTGACGGCCG
CGGATCTGATCAACCGAAAATACACGGACGCGTTCACCGAGATGATGCGCTTTCAGACGGCGCGCGCACGCGACGCGATT
CGCAAGGCGCTCGACGCACTCCCCGTCGGCGAGCGCCACTCGCAAAGCACGCTGCGCGCGCTGGCAGCGCTGGCGCTGGC
GTTGCTCGATGAAATCGAACGCGACGGCTACCATGTGCTGCATCAGCGCATCGCGCTCACGCCGATCCGCAAGTTATGGG
TCGCGTGGCGCGCGGCACGCAAACACTAA

Upstream 100 bases:

>100_bases
GACCACCGCGAACGCCCGCGCAAAAAAGCGGGTCCGAAAGCGTAAGCGCGAGATTCTAACCGATTGCCCTGCGCTTGTCT
GCATCTGTCGAATACCGTCG

Downstream 100 bases:

>100_bases
AGCGAGCTCACACTCGCATGAGCGGGAGCGGCTGCACCGCGTCGCGCAGCACCGCGTTCGCGTCCAGCTTCCAGAATGAC
GCGAGCGCCGTCGCGTAGAG

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MLQFSVFRAHLTHSRARLLSPQANPVNFDEYCQQKAAPPGSSTYYALRQAPVARQPLLTALFALRREFEETVKETTDPTI
GRTKLAWWQKEAAALAAGEPTHPVSQALAAHLPDVQAEYPALQGIIAGFEMDLDQARYLDYPNLRRYMAGVGGTFASVVA
RATAHEPSQAASWAAPLGEALMLAQIVVELGNDARHGRIYIPIDEMQRFNVTAADLINRKYTDAFTEMMRFQTARARDAI
RKALDALPVGERHSQSTLRALAALALALLDEIERDGYHVLHQRIALTPIRKLWVAWRAARKH

Sequences:

>Translated_302_residues
MLQFSVFRAHLTHSRARLLSPQANPVNFDEYCQQKAAPPGSSTYYALRQAPVARQPLLTALFALRREFEETVKETTDPTI
GRTKLAWWQKEAAALAAGEPTHPVSQALAAHLPDVQAEYPALQGIIAGFEMDLDQARYLDYPNLRRYMAGVGGTFASVVA
RATAHEPSQAASWAAPLGEALMLAQIVVELGNDARHGRIYIPIDEMQRFNVTAADLINRKYTDAFTEMMRFQTARARDAI
RKALDALPVGERHSQSTLRALAALALALLDEIERDGYHVLHQRIALTPIRKLWVAWRAARKH
>Mature_302_residues
MLQFSVFRAHLTHSRARLLSPQANPVNFDEYCQQKAAPPGSSTYYALRQAPVARQPLLTALFALRREFEETVKETTDPTI
GRTKLAWWQKEAAALAAGEPTHPVSQALAAHLPDVQAEYPALQGIIAGFEMDLDQARYLDYPNLRRYMAGVGGTFASVVA
RATAHEPSQAASWAAPLGEALMLAQIVVELGNDARHGRIYIPIDEMQRFNVTAADLINRKYTDAFTEMMRFQTARARDAI
RKALDALPVGERHSQSTLRALAALALALLDEIERDGYHVLHQRIALTPIRKLWVAWRAARKH

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 33702; Mature: 33702

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQFSVFRAHLTHSRARLLSPQANPVNFDEYCQQKAAPPGSSTYYALRQAPVARQPLLTA
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH
LFALRREFEETVKETTDPTIGRTKLAWWQKEAAALAAGEPTHPVSQALAAHLPDVQAEYP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHH
ALQGIIAGFEMDLDQARYLDYPNLRRYMAGVGGTFASVVARATAHEPSQAASWAAPLGEA
HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LMLAQIVVELGNDARHGRIYIPIDEMQRFNVTAADLINRKYTDAFTEMMRFQTARARDAI
HHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKALDALPVGERHSQSTLRALAALALALLDEIERDGYHVLHQRIALTPIRKLWVAWRAAR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
KH
CC
>Mature Secondary Structure
MLQFSVFRAHLTHSRARLLSPQANPVNFDEYCQQKAAPPGSSTYYALRQAPVARQPLLTA
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH
LFALRREFEETVKETTDPTIGRTKLAWWQKEAAALAAGEPTHPVSQALAAHLPDVQAEYP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHH
ALQGIIAGFEMDLDQARYLDYPNLRRYMAGVGGTFASVVARATAHEPSQAASWAAPLGEA
HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LMLAQIVVELGNDARHGRIYIPIDEMQRFNVTAADLINRKYTDAFTEMMRFQTARARDAI
HHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKALDALPVGERHSQSTLRALAALALALLDEIERDGYHVLHQRIALTPIRKLWVAWRAAR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
KH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA