| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475729
Identifier: 186475729
GI number: 186475729
Start: 1076162
End: 1077025
Strand: Reverse
Name: 186475729
Synonym: Bphy_0964
Alternate gene names: NA
Gene position: 1077025-1076162 (Counterclockwise)
Preceding gene: 186475731
Following gene: 186475723
Centisome position: 30.96
GC content: 65.86
Gene sequence:
>864_bases ATGCGACTGATCAGCTGGAATGTCCAGTGGGGACGCAGTGCGCACGGCGACGTGAGCCTGTCGCGCACGATCGACGAAGC GCGGCGGCTCGCCGATTTCGACGTGCTGTGCATGCAGGAAGTCACGCGCGGTTTTTCGGTGCTGGCGGGTCATCCGGGTG ACGACCAGTTCGCCGAACTGGCCGATCTGCTGCCCGGCTACACGGTGCTGGGCGCGATCGGCGCGGATCTCGCACCGCTC AAGCTCGACGCGCCCGCCGCGCCGCGCCGTCAGTTCGGCAATGCGCTAGTGACACGCTTGCCCGTCGAGCGCGTGATTCG TCACTCGCTGCCGTGGCCCGCCGACCCGGACGCGCCGTCGATGCAGCGTGTCGCGCTGGAGGCCGTGCTGCAGGCGCCCG GCGGCGCTGTCAGGGTGATCGTGACGCATCTCGAGTTTTATTCGCTGAAGCAGCGGCTAGCCCAGGTCGAACGGCTGCGC GAGATGCAGCAGGAAGCGGCCGCTCATGCTGCGAATCCTGCGCCCGCCGAGAATGCGATCGGGCCTTTTGCCGATACGGC GCGCCCAGTCAGCGCGATCGTGTGCGGCGATTTCAATAGCGCTTACGGCAGCGACGCGTATCGGCGGATGCTGGAGCCGC TTGCTGGCAGCCCCTCGTTCCTCGACGCGTGGACGGTTTTGCATCCGGGGCAGACGCCGCCCATGACGGCGGGTATCTAT GACAAGGCGCAGTGGTCCGACGGGCCGCTGACGTGCGATTTTGTGTTCGTTACCGAGGATTTACAGGCAAGGCTGCAGAG TTGCGAGATCGATGGAGGGACGCGGGCTTCGGATCATCAGCCTGTCATCGTCGAGATCGGTTGA
Upstream 100 bases:
>100_bases GGGACAGTTTCGGACACCAGCGACTTCCTGACAGACTGTGTAAAAGTGGGACCAAGCACGAGATTGTAGACGAACGACAC ACACCGACGGAGATTTGACG
Downstream 100 bases:
>100_bases TGTTTTTTGTCTGCGACCCTTTTGCAGTGCGCTTGCCGATTCACTGGCATCCGCGTTGTGCCACTGGTTTGCTGGCGTTG CCCCATGCGGGGCCACGCAT
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Phosphatase; Endonuclease/Exonuclease/Phosphatase Family Protein; Phosphatase Protein; Endonuclease / Exonuclease / Phosphatase; Metal-Dependent Exonuclease Protein
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MRLISWNVQWGRSAHGDVSLSRTIDEARRLADFDVLCMQEVTRGFSVLAGHPGDDQFAELADLLPGYTVLGAIGADLAPL KLDAPAAPRRQFGNALVTRLPVERVIRHSLPWPADPDAPSMQRVALEAVLQAPGGAVRVIVTHLEFYSLKQRLAQVERLR EMQQEAAAHAANPAPAENAIGPFADTARPVSAIVCGDFNSAYGSDAYRRMLEPLAGSPSFLDAWTVLHPGQTPPMTAGIY DKAQWSDGPLTCDFVFVTEDLQARLQSCEIDGGTRASDHQPVIVEIG
Sequences:
>Translated_287_residues MRLISWNVQWGRSAHGDVSLSRTIDEARRLADFDVLCMQEVTRGFSVLAGHPGDDQFAELADLLPGYTVLGAIGADLAPL KLDAPAAPRRQFGNALVTRLPVERVIRHSLPWPADPDAPSMQRVALEAVLQAPGGAVRVIVTHLEFYSLKQRLAQVERLR EMQQEAAAHAANPAPAENAIGPFADTARPVSAIVCGDFNSAYGSDAYRRMLEPLAGSPSFLDAWTVLHPGQTPPMTAGIY DKAQWSDGPLTCDFVFVTEDLQARLQSCEIDGGTRASDHQPVIVEIG >Mature_287_residues MRLISWNVQWGRSAHGDVSLSRTIDEARRLADFDVLCMQEVTRGFSVLAGHPGDDQFAELADLLPGYTVLGAIGADLAPL KLDAPAAPRRQFGNALVTRLPVERVIRHSLPWPADPDAPSMQRVALEAVLQAPGGAVRVIVTHLEFYSLKQRLAQVERLR EMQQEAAAHAANPAPAENAIGPFADTARPVSAIVCGDFNSAYGSDAYRRMLEPLAGSPSFLDAWTVLHPGQTPPMTAGIY DKAQWSDGPLTCDFVFVTEDLQARLQSCEIDGGTRASDHQPVIVEIG
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31085; Mature: 31085
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLISWNVQWGRSAHGDVSLSRTIDEARRLADFDVLCMQEVTRGFSVLAGHPGDDQFAEL CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH ADLLPGYTVLGAIGADLAPLKLDAPAAPRRQFGNALVTRLPVERVIRHSLPWPADPDAPS HHHCCCHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCH MQRVALEAVLQAPGGAVRVIVTHLEFYSLKQRLAQVERLREMQQEAAAHAANPAPAENAI HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GPFADTARPVSAIVCGDFNSAYGSDAYRRMLEPLAGSPSFLDAWTVLHPGQTPPMTAGIY CCCHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHEEEECCCCCCCCCCCCC DKAQWSDGPLTCDFVFVTEDLQARLQSCEIDGGTRASDHQPVIVEIG CCCCCCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MRLISWNVQWGRSAHGDVSLSRTIDEARRLADFDVLCMQEVTRGFSVLAGHPGDDQFAEL CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH ADLLPGYTVLGAIGADLAPLKLDAPAAPRRQFGNALVTRLPVERVIRHSLPWPADPDAPS HHHCCCHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCH MQRVALEAVLQAPGGAVRVIVTHLEFYSLKQRLAQVERLREMQQEAAAHAANPAPAENAI HHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GPFADTARPVSAIVCGDFNSAYGSDAYRRMLEPLAGSPSFLDAWTVLHPGQTPPMTAGIY CCCHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHEEEECCCCCCCCCCCCC DKAQWSDGPLTCDFVFVTEDLQARLQSCEIDGGTRASDHQPVIVEIG CCCCCCCCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA