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The map label for this gene is yhbY [C]

Identifier: 186475642

GI number: 186475642

Start: 980288

End: 980851

Strand: Reverse

Name: yhbY [C]

Synonym: Bphy_0877

Alternate gene names: 186475642

Gene position: 980851-980288 (Counterclockwise)

Preceding gene: 186475654

Following gene: 186475634

Centisome position: 28.19

GC content: 62.77

Gene sequence:

>564_bases
ATGCCCGCCCTCAAAGTTACTTCCGAACAACGCGCCGACTTGCGCTCCCAGGCTCACGCGCTCAAGCCGGTCGTGATCAT
TGGCGCCGAAGGACTGACCGACGCCGTGCTGGCCGAAATCAAGGTCCACCTGAAAGCGCACCAGCTGATCAAGATCCGCG
TATTCGGCGACGAGCGCGAAGAGCGCGTCGCGATCTACGATGAAATCTGTGATCGTCTGAATGCCGCGCCGATCCAGCAC
ATCGGCAAGCTTCTCGTCATCTGGAAGCCCGAAAAGGAAGCGACCGAGCGCGCTCCCACGGCTAAAGCCAAGGCCGGCGT
GAAGCCGGCCGCGAAACGCGGCGCGCTCCCCAGCGCCCGCGAAGCCGCAGAGGAAGCGGCTTCGAACAAGGGACGCGCAC
CTCGCGTCGTGAAGATCGTCAAGGCGACCGACAATCCGCTGCGCCGCCCGAAGCCGCAAAAAGTGCTGGTGCGCGGCAAC
GAGCGCGTGACGGCAGGCGGTAACATCAAGAAAGCCAAGAAACGCCAGACCAGCGCAAAGCGCATGCATCAGACGTCGAA
GTAA

Upstream 100 bases:

>100_bases
AACCGCAGTTTCCTAACTTTCGCGCGCCGTCTGCCGTTTCGCCGGATCGACCGATTCCTGCTCGCGGGCGCCGCCATTTT
AGTCGAGTCTTCCACTTCAC

Downstream 100 bases:

>100_bases
ACCGAAAGTGGCGCGGAAAGCGGATTGGACATGTGTGGACCGTGCCGACCGAAGCACCCGCGCTCAGGGCGCATCATGTG
GCGGTCATCCACCGCGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MPALKVTSEQRADLRSQAHALKPVVIIGAEGLTDAVLAEIKVHLKAHQLIKIRVFGDEREERVAIYDEICDRLNAAPIQH
IGKLLVIWKPEKEATERAPTAKAKAGVKPAAKRGALPSAREAAEEAASNKGRAPRVVKIVKATDNPLRRPKPQKVLVRGN
ERVTAGGNIKKAKKRQTSAKRMHQTSK

Sequences:

>Translated_187_residues
MPALKVTSEQRADLRSQAHALKPVVIIGAEGLTDAVLAEIKVHLKAHQLIKIRVFGDEREERVAIYDEICDRLNAAPIQH
IGKLLVIWKPEKEATERAPTAKAKAGVKPAAKRGALPSAREAAEEAASNKGRAPRVVKIVKATDNPLRRPKPQKVLVRGN
ERVTAGGNIKKAKKRQTSAKRMHQTSK
>Mature_186_residues
PALKVTSEQRADLRSQAHALKPVVIIGAEGLTDAVLAEIKVHLKAHQLIKIRVFGDEREERVAIYDEICDRLNAAPIQHI
GKLLVIWKPEKEATERAPTAKAKAGVKPAAKRGALPSAREAAEEAASNKGRAPRVVKIVKATDNPLRRPKPQKVLVRGNE
RVTAGGNIKKAKKRQTSAKRMHQTSK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=90, Percent_Identity=41.1111111111111, Blast_Score=78, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 20482; Mature: 20351

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALKVTSEQRADLRSQAHALKPVVIIGAEGLTDAVLAEIKVHLKAHQLIKIRVFGDERE
CCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHEEEEEEEEEEEECCCCC
ERVAIYDEICDRLNAAPIQHIGKLLVIWKPEKEATERAPTAKAKAGVKPAAKRGALPSAR
HHHHHHHHHHHHCCCCCHHHCCCEEEEECCCHHHHHCCCCCHHHCCCCCHHHHCCCCCHH
EAAEEAASNKGRAPRVVKIVKATDNPLRRPKPQKVLVRGNERVTAGGNIKKAKKRQTSAK
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHHHHH
RMHQTSK
HHHHCCC
>Mature Secondary Structure 
PALKVTSEQRADLRSQAHALKPVVIIGAEGLTDAVLAEIKVHLKAHQLIKIRVFGDERE
CCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHEEEEEEEEEEEECCCCC
ERVAIYDEICDRLNAAPIQHIGKLLVIWKPEKEATERAPTAKAKAGVKPAAKRGALPSAR
HHHHHHHHHHHHCCCCCHHHCCCEEEEECCCHHHHHCCCCCHHHCCCCCHHHHCCCCCHH
EAAEEAASNKGRAPRVVKIVKATDNPLRRPKPQKVLVRGNERVTAGGNIKKAKKRQTSAK
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHHHHH
RMHQTSK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]