Click here to switch to the map view.

The map label for this gene is yceD [C]

Identifier: 186475590

GI number: 186475590

Start: 925228

End: 925866

Strand: Direct

Name: yceD [C]

Synonym: Bphy_0825

Alternate gene names: 186475590

Gene position: 925228-925866 (Clockwise)

Preceding gene: 186475587

Following gene: 186475591

Centisome position: 26.59

GC content: 61.97

Gene sequence:

>639_bases
ATGACTCAACATCCTGGCAAACCTGCTGGTCTCGTCGACCCGCGCGCACTCGACCTGTTCGAATTCGCACGCAGTGGACG
TCAGGCCGCGGGTACCGTGCGCGTCTCGCAACTGCCGCGCATGTTAAACGAAGTCCCGGAGGAAGCGCCAGACCGCGATA
CCGCGTTCACCTGGCAAGCCGAAGGGACGACGCAGCCGGAATTGCAGGACGACGGCACCGAAGGGCCGCAGCCGTACCTG
AGGCTCGCGATTCACGGCGCCGCGTGGCTGGAATGTCAGCGTTGCCTGTCTCCGTACGAGCAGGCCTTCAACGTCGATGC
GACTTACCGGATCGTCAATACCGAAGAGGAAGCTGAAGAGTTTCCTCTCGACGAGGATGAAGTCGATGTGATCGTTGGGT
CACGCCAGTTCGATCTTGTCGACTTGATCGAAGAGGAATTGCTGCTTTCATTGCCGCTCGTGCCGAAGCACGACATCTGC
CCCGAAGTGCACGAGAGTCTCACCTCGGGCGTAGCCGGGCTGGAAGACGAAGAGGCCGCCGAGGGCGAAGCCGAAGAGGG
TGAAGAACCCGCGCGGCCGAATCCTTTTGCGGCGCTCGAAGGCCTGAAGTCGGGCGGGTCCGGCGGCAAGAAGCACTGA

Upstream 100 bases:

>100_bases
CAAATGGCGCCCCGGACGGACTTCTGTTCGTCATTTCAGCGCCAGCCAGCAGGGCATAGTGACTTACCCGGCTGAAATCC
TTGCCGACGCAGGAGCGCAC

Downstream 100 bases:

>100_bases
ACAGTTGCAAGGGGGCGCGATGAGGTGCGCCGGACACGGTGGCTTAGCCACGTGGCCTATGGCGGTTGCCGCATCGGGCT
GTGTTAGAATTCGGAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTQHPGKPAGLVDPRALDLFEFARSGRQAAGTVRVSQLPRMLNEVPEEAPDRDTAFTWQAEGTTQPELQDDGTEGPQPYL
RLAIHGAAWLECQRCLSPYEQAFNVDATYRIVNTEEEAEEFPLDEDEVDVIVGSRQFDLVDLIEEELLLSLPLVPKHDIC
PEVHESLTSGVAGLEDEEAAEGEAEEGEEPARPNPFAALEGLKSGGSGGKKH

Sequences:

>Translated_212_residues
MTQHPGKPAGLVDPRALDLFEFARSGRQAAGTVRVSQLPRMLNEVPEEAPDRDTAFTWQAEGTTQPELQDDGTEGPQPYL
RLAIHGAAWLECQRCLSPYEQAFNVDATYRIVNTEEEAEEFPLDEDEVDVIVGSRQFDLVDLIEEELLLSLPLVPKHDIC
PEVHESLTSGVAGLEDEEAAEGEAEEGEEPARPNPFAALEGLKSGGSGGKKH
>Mature_211_residues
TQHPGKPAGLVDPRALDLFEFARSGRQAAGTVRVSQLPRMLNEVPEEAPDRDTAFTWQAEGTTQPELQDDGTEGPQPYLR
LAIHGAAWLECQRCLSPYEQAFNVDATYRIVNTEEEAEEFPLDEDEVDVIVGSRQFDLVDLIEEELLLSLPLVPKHDICP
EVHESLTSGVAGLEDEEAAEGEAEEGEEPARPNPFAALEGLKSGGSGGKKH

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23188; Mature: 23057

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHPGKPAGLVDPRALDLFEFARSGRQAAGTVRVSQLPRMLNEVPEEAPDRDTAFTWQA
CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC
EGTTQPELQDDGTEGPQPYLRLAIHGAAWLECQRCLSPYEQAFNVDATYRIVNTEEEAEE
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
FPLDEDEVDVIVGSRQFDLVDLIEEELLLSLPLVPKHDICPEVHESLTSGVAGLEDEEAA
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH
EGEAEEGEEPARPNPFAALEGLKSGGSGGKKH
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TQHPGKPAGLVDPRALDLFEFARSGRQAAGTVRVSQLPRMLNEVPEEAPDRDTAFTWQA
CCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEC
EGTTQPELQDDGTEGPQPYLRLAIHGAAWLECQRCLSPYEQAFNVDATYRIVNTEEEAEE
CCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH
FPLDEDEVDVIVGSRQFDLVDLIEEELLLSLPLVPKHDICPEVHESLTSGVAGLEDEEAA
CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH
EGEAEEGEEPARPNPFAALEGLKSGGSGGKKH
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA