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The map label for this gene is vdlD [H]

Identifier: 186475559

GI number: 186475559

Start: 891968

End: 892474

Strand: Direct

Name: vdlD [H]

Synonym: Bphy_0794

Alternate gene names: 186475559

Gene position: 891968-892474 (Clockwise)

Preceding gene: 186475558

Following gene: 186475564

Centisome position: 25.64

GC content: 65.09

Gene sequence:

>507_bases
ATGAGCACGCCAATCGCCGCGCCGCTGGATCGTTCAGAAACCACGTTCCGCTTTCTCGCCGAGCCCACCTCGGTCAATTT
CGGCGGCAAGGTGCACGGCGGCGCGCTGATGAAATGGATCGACGAGACCGCGTATGCGTGCTCGGCCGTCTGGTCGGGCC
GCTACTGCGTGACGGTCAGCGTCGGCAATATCCGTTTCCGCCGGCCGATCCACGTCGGCAACCTGGTCGAACTGCGCGCG
CGCGTCGTCGCAACGGGCCGCACCAGCATGCATATCCACGTGTCCGTCCATGCTGGCGATCCGAAGGGCGGCGAACTGCT
GCAAACGACGGACTGCCTTGTCGTGATGGTCGCCGTCAACGAGAACGGCAGCCCCGTGCCCGTGCCGCCGTTCGTGCCGC
AGACCGACGAACAGAAGCGTCTCGCGCATTACGCGATGGACGTGAAGGCCGCGCTCGATGCGATCGTCGACCTGAAACCC
GAGGAAGTGGCGCAGGGCAAGGTGTAA

Upstream 100 bases:

>100_bases
CATCGGCGCTGCGCTGAACTGGCCGCGCCGATACCACAGCGGCAGCCTTATTGCGCTCGTATAATCGCCTCCTTTCGATA
GCTGTTTGACGGGAGTCAAG

Downstream 100 bases:

>100_bases
TGCGCCGGGACGGATGCTCTCCCCGCGGTCCCGAACGAGAGCATCCCGGCAATGGAAAGACTTTTAGCGCTTCGCGTTGC
CGACCATGTCGTGCGGGCGC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSTPIAAPLDRSETTFRFLAEPTSVNFGGKVHGGALMKWIDETAYACSAVWSGRYCVTVSVGNIRFRRPIHVGNLVELRA
RVVATGRTSMHIHVSVHAGDPKGGELLQTTDCLVVMVAVNENGSPVPVPPFVPQTDEQKRLAHYAMDVKAALDAIVDLKP
EEVAQGKV

Sequences:

>Translated_168_residues
MSTPIAAPLDRSETTFRFLAEPTSVNFGGKVHGGALMKWIDETAYACSAVWSGRYCVTVSVGNIRFRRPIHVGNLVELRA
RVVATGRTSMHIHVSVHAGDPKGGELLQTTDCLVVMVAVNENGSPVPVPPFVPQTDEQKRLAHYAMDVKAALDAIVDLKP
EEVAQGKV
>Mature_167_residues
STPIAAPLDRSETTFRFLAEPTSVNFGGKVHGGALMKWIDETAYACSAVWSGRYCVTVSVGNIRFRRPIHVGNLVELRAR
VVATGRTSMHIHVSVHAGDPKGGELLQTTDCLVVMVAVNENGSPVPVPPFVPQTDEQKRLAHYAMDVKAALDAIVDLKPE
EVAQGKV

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528284, Length=138, Percent_Identity=32.6086956521739, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI32528286, Length=138, Percent_Identity=32.6086956521739, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI75709208, Length=138, Percent_Identity=32.6086956521739, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI32528282, Length=138, Percent_Identity=32.6086956521739, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18147; Mature: 18016

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPIAAPLDRSETTFRFLAEPTSVNFGGKVHGGALMKWIDETAYACSAVWSGRYCVTVS
CCCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEEE
VGNIRFRRPIHVGNLVELRARVVATGRTSMHIHVSVHAGDPKGGELLQTTDCLVVMVAVN
ECCEEEECCCCCCCHHHEEEEEEEECCCEEEEEEEEECCCCCCCCEEEECCEEEEEEEEC
ENGSPVPVPPFVPQTDEQKRLAHYAMDVKAALDAIVDLKPEEVAQGKV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
STPIAAPLDRSETTFRFLAEPTSVNFGGKVHGGALMKWIDETAYACSAVWSGRYCVTVS
CCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEEE
VGNIRFRRPIHVGNLVELRARVVATGRTSMHIHVSVHAGDPKGGELLQTTDCLVVMVAVN
ECCEEEECCCCCCCHHHEEEEEEEECCCEEEEEEEEECCCCCCCCEEEECCEEEEEEEEC
ENGSPVPVPPFVPQTDEQKRLAHYAMDVKAALDAIVDLKPEEVAQGKV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]