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The map label for this gene is yddS [H]

Identifier: 186475557

GI number: 186475557

Start: 889502

End: 890761

Strand: Direct

Name: yddS [H]

Synonym: Bphy_0792

Alternate gene names: 186475557

Gene position: 889502-890761 (Clockwise)

Preceding gene: 186475556

Following gene: 186475558

Centisome position: 25.57

GC content: 69.6

Gene sequence:

>1260_bases
ATGTCGTCATCTTCCACTGCCGCTCCCGCCGTCCGCCCGCTTGTGCCCGCTGGTTATGGCGCCGCGCAAGGCCGCCGCGC
CGCGCGGGTGCTGGCCGTCTGCCAGGCTCTCTATACGTCGTCGGTATCGATCGATCTGACGCTCACGGGTCTCGTCGGCT
ACACACTCGCCGACGACAAGTCGCTCGCCACGCTGCCGTTTTCGCTCATCACCGTCGCCGCGGCGCTGACGACCGTCTTC
GCGTCGTTTCTGATGGCGCGCATCGGCCGGCGCGCGGGTTTTCTGCTGGGCGCGGGCATCGGCGCGGCGGGCGGCGCGAT
CTCGGTGTATGCGATCTTCCACCACAGTTTCTGGGCGTTCTGCGCGGGCACGGCGACCGTCGGCGTCTTTCAGGCGTTCG
CGCAGTACTACCGTCTCGCCGCCGCCGACGCCGTTCCTGTCGAAGCGAAGAGCCGTGCGATCTCGACAGTGCTGACGGGC
GGTGTCGTGGCCGCCGTACTTGGACCGGCGCTGGCCGCGTGGAGCAAGGGCTGGCTTGCGCCCGTCGCGTTCGCAGGTTC
CTATGCGCTCGTCATGGGGCTCGGCCTGCTGTCGGTGCTGCTCGTCGCCGGCCTGTATCGCGATGCCGCGCCGCAGGCGG
ACGCCACCTCGCACCGCGAACCCGCGCGCCCGTGGCGCGCGATCGTCCGCCAGCCGATCTTCGTCGCGGCGCTGGCGAAC
AACGCGCTCGGCTACGCCGTGATGATGATCGTGATGACGGCGACGCCGATTGCCGCCGTCGCTTGCGGCCATTCGATCGG
CGACGGCGCACAGATCATCCAGTGGCATCTGGTCGGCATGTTCGCGCCGTCGTTTTTCTCGGCGCGCCTGATCGCGCGCT
TCGGCGTGCTGCGCGTAATCGGCGCCGGCATTGTGCTGTCCGCGCTGTGCGGCGTCCTCGCGTTGCGCTCGACCGACCTC
CCGCATTTCTACGCGGCGCTCGCCTGCCTCGGCGTTGGCTGGAACCTGATGTTCGTCGGCGGCACGACGCTGCTCGCGCA
GTCGTACCGGCCGTCCGAGCGCGCGAAGACACAGGCGACCAGCGAGTTCACGACCTTTGCGTTCTCCGCGATCGGCTCGC
TGTGCGCCGGGCAGATGCTCGCGCACTTCGGCTGGGCGGCCATCAACGCGGCGATCTTCCCGTTCCTCGCGCTGGCGGCG
CTCGCGACGCTGGCGTTCGCGTGGTCGGGCAAGCGCGTGGCGGCGGCGTCGAATCTGTGA

Upstream 100 bases:

>100_bases
GCGCGTGCGTGTCTGGCAGAAATTGATGCATCATTGGCTTTCTGCCAACGCAAACGATGTGACGATGCCGACATCGTCAC
CACCCGCCGCGAGGCCGCCG

Downstream 100 bases:

>100_bases
GCACTTTCCGATAACGCACGAGGACCCCGCGATGAGCGATACGCCCAACGAAACCGGCCCGCTGGCCAACGATCCGCCCG
CGCCCAAAGTTCGCCATGTC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSSSSTAAPAVRPLVPAGYGAAQGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKSLATLPFSLITVAAALTTVF
ASFLMARIGRRAGFLLGAGIGAAGGAISVYAIFHHSFWAFCAGTATVGVFQAFAQYYRLAAADAVPVEAKSRAISTVLTG
GVVAAVLGPALAAWSKGWLAPVAFAGSYALVMGLGLLSVLLVAGLYRDAAPQADATSHREPARPWRAIVRQPIFVAALAN
NALGYAVMMIVMTATPIAAVACGHSIGDGAQIIQWHLVGMFAPSFFSARLIARFGVLRVIGAGIVLSALCGVLALRSTDL
PHFYAALACLGVGWNLMFVGGTTLLAQSYRPSERAKTQATSEFTTFAFSAIGSLCAGQMLAHFGWAAINAAIFPFLALAA
LATLAFAWSGKRVAAASNL

Sequences:

>Translated_419_residues
MSSSSTAAPAVRPLVPAGYGAAQGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKSLATLPFSLITVAAALTTVF
ASFLMARIGRRAGFLLGAGIGAAGGAISVYAIFHHSFWAFCAGTATVGVFQAFAQYYRLAAADAVPVEAKSRAISTVLTG
GVVAAVLGPALAAWSKGWLAPVAFAGSYALVMGLGLLSVLLVAGLYRDAAPQADATSHREPARPWRAIVRQPIFVAALAN
NALGYAVMMIVMTATPIAAVACGHSIGDGAQIIQWHLVGMFAPSFFSARLIARFGVLRVIGAGIVLSALCGVLALRSTDL
PHFYAALACLGVGWNLMFVGGTTLLAQSYRPSERAKTQATSEFTTFAFSAIGSLCAGQMLAHFGWAAINAAIFPFLALAA
LATLAFAWSGKRVAAASNL
>Mature_418_residues
SSSSTAAPAVRPLVPAGYGAAQGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDKSLATLPFSLITVAAALTTVFA
SFLMARIGRRAGFLLGAGIGAAGGAISVYAIFHHSFWAFCAGTATVGVFQAFAQYYRLAAADAVPVEAKSRAISTVLTGG
VVAAVLGPALAAWSKGWLAPVAFAGSYALVMGLGLLSVLLVAGLYRDAAPQADATSHREPARPWRAIVRQPIFVAALANN
ALGYAVMMIVMTATPIAAVACGHSIGDGAQIIQWHLVGMFAPSFFSARLIARFGVLRVIGAGIVLSALCGVLALRSTDLP
HFYAALACLGVGWNLMFVGGTTLLAQSYRPSERAKTQATSEFTTFAFSAIGSLCAGQMLAHFGWAAINAAIFPFLALAAL
ATLAFAWSGKRVAAASNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 43142; Mature: 43011

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSTAAPAVRPLVPAGYGAAQGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHEEEECCCC
SLATLPFSLITVAAALTTVFASFLMARIGRRAGFLLGAGIGAAGGAISVYAIFHHSFWAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCCHHHHHHHHHHHHHHH
CAGTATVGVFQAFAQYYRLAAADAVPVEAKSRAISTVLTGGVVAAVLGPALAAWSKGWLA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
PVAFAGSYALVMGLGLLSVLLVAGLYRDAAPQADATSHREPARPWRAIVRQPIFVAALAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHEEHHHC
NALGYAVMMIVMTATPIAAVACGHSIGDGAQIIQWHLVGMFAPSFFSARLIARFGVLRVI
CHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGIVLSALCGVLALRSTDLPHFYAALACLGVGWNLMFVGGTTLLAQSYRPSERAKTQAT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCHHHHHHHH
SEFTTFAFSAIGSLCAGQMLAHFGWAAINAAIFPFLALAALATLAFAWSGKRVAAASNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
>Mature Secondary Structure 
SSSSTAAPAVRPLVPAGYGAAQGRRAARVLAVCQALYTSSVSIDLTLTGLVGYTLADDK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHEEEECCCC
SLATLPFSLITVAAALTTVFASFLMARIGRRAGFLLGAGIGAAGGAISVYAIFHHSFWAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCCHHHHHHHHHHHHHHH
CAGTATVGVFQAFAQYYRLAAADAVPVEAKSRAISTVLTGGVVAAVLGPALAAWSKGWLA
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
PVAFAGSYALVMGLGLLSVLLVAGLYRDAAPQADATSHREPARPWRAIVRQPIFVAALAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHEEHHHC
NALGYAVMMIVMTATPIAAVACGHSIGDGAQIIQWHLVGMFAPSFFSARLIARFGVLRVI
CHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAGIVLSALCGVLALRSTDLPHFYAALACLGVGWNLMFVGGTTLLAQSYRPSERAKTQAT
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCHHHHHHHH
SEFTTFAFSAIGSLCAGQMLAHFGWAAINAAIFPFLALAALATLAFAWSGKRVAAASNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]