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The map label for this gene is 186475532

Identifier: 186475532

GI number: 186475532

Start: 864229

End: 865389

Strand: Direct

Name: 186475532

Synonym: Bphy_0767

Alternate gene names: NA

Gene position: 864229-865389 (Clockwise)

Preceding gene: 186475531

Following gene: 186475534

Centisome position: 24.84

GC content: 63.05

Gene sequence:

>1161_bases
ATGCTGTTCTTGACGTGTGCCGTGACCGACTTCGACCGAGACATTCCTGAATATCCGATCGCGCCGCCTGCTCCGCGCAA
AGGGCGCGGCGCGGTGACGAATCTGCAGGGCCGCTACGAAGTGGATCAGCGCGAGGCGGTCGACGACGGCTGGATAGCGC
CGTCGGAAGAAGAATCAGGTCGTCCGGCGTTGCGTACGCAGATTTTCGAGGAGCGCGCGAAAAGCATCCTCACCCATAAC
GAGTCGCCGGACATCCCGTTCAGCGTGTCGCTGAATCCGTATCGCGGATGCGAACACGGCTGCATCTACTGCTTCGCGCG
GCCCACGCACAGCTACCTCGGCTTGTCGCCGGGCCTCGACTTCGAGAGCCGGATTTACGCGAAGGTCAACGCGCCCGAAC
TGCTGGCGCGGGAGATGGCGAAGAAGTCGTATGTGCCCGAGCCGATTGCGCTCGGCGTGAACACGGATGCGTGGCAGCCC
GTCGAACGCGATTTGCAACTCACACGGCGGATTATCCAGGTCATGAGCGACCACAATCAGGCGTTCGCGGCAATCACGAA
AAATTCGCTGATCGAGCGGGATATCGATCTGCTCGCGCCGATGGCCGCGAAAGGGCTGATGATGGCCGCGATCACCATCA
CGACACTCGACGCTGACATCGCGCGCACGCTCGAACCGCGTGCGGCGACGCCCGCGCGGCGGCTCAGAACGATCCGTGCG
TTGAGCGAGGCGGGCGTCCCCGTGGGCGTCAGTATTGCGCCCGTGGTCCCATTCGTCACCGACCAGGACATGGAGCGCGT
GCTCGAAGCATGCGCGGAGGCTGGCGCGACCAGCGCGAGCTATATCGTGCTGCGTCTACCGTGGGAGGTCGCGCCGCTCT
TCAAGGGTTGGCTCAAAGCGCATTTCCCCGATCGCGCGGAGCGGGTGATGAACCGCGTGCACGACATGCGCGGCGGCAAG
GACTACGATTCGTCGTTTTCTACGCGTATGAAAGGCGAGGGGCTGTGGGCGGACCTGCTAAGGCAGCGTTTTGCTAATGC
AGTTCGGCGGGTCGGGATGAACGCTCGCAATCACGGCATTCTCGATATGTCGCATTTCCGGCGCGTGGAGCCGCGCGAGC
CCACGGCACCTCAACCTTCGCCGCAGATGAATCTCTTTTGA

Upstream 100 bases:

>100_bases
CTCCCCACGCTGAATCGACGGGTCGCTGCCGCAGCCGAACCGGCCCCCAAAATCGAACTCGACAAAGACGGTAAACACTG
TATATTTGTACAGTATTCAA

Downstream 100 bases:

>100_bases
CTACCGGCTTGCGGCAGGCAGCTTATTGCGAAATTGCTTTTGCGGCTTCAACCTGAGATTCGAAGTAGGTTTGGAACGCC
AGTGCGAGGCCCGTCATCAA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLFLTCAVTDFDRDIPEYPIAPPAPRKGRGAVTNLQGRYEVDQREAVDDGWIAPSEEESGRPALRTQIFEERAKSILTHN
ESPDIPFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAPELLAREMAKKSYVPEPIALGVNTDAWQP
VERDLQLTRRIIQVMSDHNQAFAAITKNSLIERDIDLLAPMAAKGLMMAAITITTLDADIARTLEPRAATPARRLRTIRA
LSEAGVPVGVSIAPVVPFVTDQDMERVLEACAEAGATSASYIVLRLPWEVAPLFKGWLKAHFPDRAERVMNRVHDMRGGK
DYDSSFSTRMKGEGLWADLLRQRFANAVRRVGMNARNHGILDMSHFRRVEPREPTAPQPSPQMNLF

Sequences:

>Translated_386_residues
MLFLTCAVTDFDRDIPEYPIAPPAPRKGRGAVTNLQGRYEVDQREAVDDGWIAPSEEESGRPALRTQIFEERAKSILTHN
ESPDIPFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAPELLAREMAKKSYVPEPIALGVNTDAWQP
VERDLQLTRRIIQVMSDHNQAFAAITKNSLIERDIDLLAPMAAKGLMMAAITITTLDADIARTLEPRAATPARRLRTIRA
LSEAGVPVGVSIAPVVPFVTDQDMERVLEACAEAGATSASYIVLRLPWEVAPLFKGWLKAHFPDRAERVMNRVHDMRGGK
DYDSSFSTRMKGEGLWADLLRQRFANAVRRVGMNARNHGILDMSHFRRVEPREPTAPQPSPQMNLF
>Mature_386_residues
MLFLTCAVTDFDRDIPEYPIAPPAPRKGRGAVTNLQGRYEVDQREAVDDGWIAPSEEESGRPALRTQIFEERAKSILTHN
ESPDIPFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLDFESRIYAKVNAPELLAREMAKKSYVPEPIALGVNTDAWQP
VERDLQLTRRIIQVMSDHNQAFAAITKNSLIERDIDLLAPMAAKGLMMAAITITTLDADIARTLEPRAATPARRLRTIRA
LSEAGVPVGVSIAPVVPFVTDQDMERVLEACAEAGATSASYIVLRLPWEVAPLFKGWLKAHFPDRAERVMNRVHDMRGGK
DYDSSFSTRMKGEGLWADLLRQRFANAVRRVGMNARNHGILDMSHFRRVEPREPTAPQPSPQMNLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 43134; Mature: 43134

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLTCAVTDFDRDIPEYPIAPPAPRKGRGAVTNLQGRYEVDQREAVDDGWIAPSEEESG
CEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCCCCCCCCCCCC
RPALRTQIFEERAKSILTHNESPDIPFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLD
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCC
FESRIYAKVNAPELLAREMAKKSYVPEPIALGVNTDAWQPVERDLQLTRRIIQVMSDHNQ
CCCEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCH
AFAAITKNSLIERDIDLLAPMAAKGLMMAAITITTLDADIARTLEPRAATPARRLRTIRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHH
LSEAGVPVGVSIAPVVPFVTDQDMERVLEACAEAGATSASYIVLRLPWEVAPLFKGWLKA
HHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
HFPDRAERVMNRVHDMRGGKDYDSSFSTRMKGEGLWADLLRQRFANAVRRVGMNARNHGI
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
LDMSHFRRVEPREPTAPQPSPQMNLF
EEHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLFLTCAVTDFDRDIPEYPIAPPAPRKGRGAVTNLQGRYEVDQREAVDDGWIAPSEEESG
CEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCCCCCCCCCCCC
RPALRTQIFEERAKSILTHNESPDIPFSVSLNPYRGCEHGCIYCFARPTHSYLGLSPGLD
CHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCHHCCCCCCCC
FESRIYAKVNAPELLAREMAKKSYVPEPIALGVNTDAWQPVERDLQLTRRIIQVMSDHNQ
CCCEEEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCH
AFAAITKNSLIERDIDLLAPMAAKGLMMAAITITTLDADIARTLEPRAATPARRLRTIRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHH
LSEAGVPVGVSIAPVVPFVTDQDMERVLEACAEAGATSASYIVLRLPWEVAPLFKGWLKA
HHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
HFPDRAERVMNRVHDMRGGKDYDSSFSTRMKGEGLWADLLRQRFANAVRRVGMNARNHGI
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
LDMSHFRRVEPREPTAPQPSPQMNLF
EEHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]