Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475452

Identifier: 186475452

GI number: 186475452

Start: 774129

End: 774830

Strand: Direct

Name: 186475452

Synonym: Bphy_0687

Alternate gene names: NA

Gene position: 774129-774830 (Clockwise)

Preceding gene: 186475449

Following gene: 186475454

Centisome position: 22.25

GC content: 64.39

Gene sequence:

>702_bases
ATGAAGCTCGACCGATTGACCCGCCACGCGGCAACGGTGCTCGCGGCGCTCGCCATGCTGCTCGCAGGCTGCACGACCTA
TGTGACGACGCAGGTGACGGCCTTTTCCGACTGGAGCGGCAGCGATGCGACGCGCACCTATGCGTTCACGCGCACGCAGG
ATCAAAAGAACAATCTCGAGCAGGACACGTACGAGCAGATCGTCGCAAACGAACTCGCGCTGCATGCGTTCCGGCAGACG
GGCGAACGCGACGCGCATTATCTGGTGGCGCTCGCATACGGCATGCGCCCGGATACCGTGATCGTCGCGCAACCTGTGTA
CTACAACCCGTGGCCGGGCCCGTACTACTGGGGACGTCCTTTCGATCCGTGGGGACCGTGGGGCCCTTGGGGTCCGTATC
CGACCGGGTACGTGAACCAGAGCTACCCCGTGTACACGCATCTGCTCGCCATCCGTATTACAGATCGCGCGACGGGGAAG
GAAATGTACAACGTGACGGCGCGCAACACAGACGAGCAGTCTTCGCTGATCGCCGCCATGCCGTTTCTCGCGCGCAGTGC
GATGTCCGACTTCCCGCTGGCCAACGGCGCGGTGCGCACCGTGAAGCTGCCTGTCGACGGAAAGGGTGGCTTGTCCAACG
AAGTCGCCGCCGACAGCCCCGCGCCGTCCGTGCCCGCATCGGGGGCGAAGACCGTTCAGTAG

Upstream 100 bases:

>100_bases
CCGATCGTGCGGACAGAACTTTTTGCCGCCGTTCGCAGTCAGCGTATCATCGGGCCGCCCGCGCGGCAGACGCCGGGCGA
CGATACCAACGAGGACGACC

Downstream 100 bases:

>100_bases
CAGCGTTCGAGTCCGCGTCGAGGGCAAAAAAACGGCCACATCGCGTGAGCGATGCGGCCGTTGCTATTGGCTGCCGCAAT
TGTCGAATCGCCGCGATGTC

Product: putative transmembrane lipoprotein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKLDRLTRHAATVLAALAMLLAGCTTYVTTQVTAFSDWSGSDATRTYAFTRTQDQKNNLEQDTYEQIVANELALHAFRQT
GERDAHYLVALAYGMRPDTVIVAQPVYYNPWPGPYYWGRPFDPWGPWGPWGPYPTGYVNQSYPVYTHLLAIRITDRATGK
EMYNVTARNTDEQSSLIAAMPFLARSAMSDFPLANGAVRTVKLPVDGKGGLSNEVAADSPAPSVPASGAKTVQ

Sequences:

>Translated_233_residues
MKLDRLTRHAATVLAALAMLLAGCTTYVTTQVTAFSDWSGSDATRTYAFTRTQDQKNNLEQDTYEQIVANELALHAFRQT
GERDAHYLVALAYGMRPDTVIVAQPVYYNPWPGPYYWGRPFDPWGPWGPWGPYPTGYVNQSYPVYTHLLAIRITDRATGK
EMYNVTARNTDEQSSLIAAMPFLARSAMSDFPLANGAVRTVKLPVDGKGGLSNEVAADSPAPSVPASGAKTVQ
>Mature_233_residues
MKLDRLTRHAATVLAALAMLLAGCTTYVTTQVTAFSDWSGSDATRTYAFTRTQDQKNNLEQDTYEQIVANELALHAFRQT
GERDAHYLVALAYGMRPDTVIVAQPVYYNPWPGPYYWGRPFDPWGPWGPWGPYPTGYVNQSYPVYTHLLAIRITDRATGK
EMYNVTARNTDEQSSLIAAMPFLARSAMSDFPLANGAVRTVKLPVDGKGGLSNEVAADSPAPSVPASGAKTVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25600; Mature: 25600

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDRLTRHAATVLAALAMLLAGCTTYVTTQVTAFSDWSGSDATRTYAFTRTQDQKNNLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCHHCCCC
QDTYEQIVANELALHAFRQTGERDAHYLVALAYGMRPDTVIVAQPVYYNPWPGPYYWGRP
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCEECCCCCCCCCCCC
FDPWGPWGPWGPYPTGYVNQSYPVYTHLLAIRITDRATGKEMYNVTARNTDEQSSLIAAM
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHEEEECCCCCHHHHHHHHH
PFLARSAMSDFPLANGAVRTVKLPVDGKGGLSNEVAADSPAPSVPASGAKTVQ
HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLDRLTRHAATVLAALAMLLAGCTTYVTTQVTAFSDWSGSDATRTYAFTRTQDQKNNLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEEECCCHHCCCC
QDTYEQIVANELALHAFRQTGERDAHYLVALAYGMRPDTVIVAQPVYYNPWPGPYYWGRP
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCEECCCCCCCCCCCC
FDPWGPWGPWGPYPTGYVNQSYPVYTHLLAIRITDRATGKEMYNVTARNTDEQSSLIAAM
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHEEEECCCCCHHHHHHHHH
PFLARSAMSDFPLANGAVRTVKLPVDGKGGLSNEVAADSPAPSVPASGAKTVQ
HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA