| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475418
Identifier: 186475418
GI number: 186475418
Start: 738710
End: 739300
Strand: Direct
Name: 186475418
Synonym: Bphy_0652
Alternate gene names: NA
Gene position: 738710-739300 (Clockwise)
Preceding gene: 186475417
Following gene: 186475419
Centisome position: 21.23
GC content: 68.19
Gene sequence:
>591_bases ATGAAGCGAATCGAATTCGCGCGTTGCGCCTCGCTGTGCGTCGTGGGCATGGCGCTGCTGGCGGCCTGCGCTTCGCCGCG CTCCAGTTTCTATACATTGAGCCCAGATTCGACGCTTGAAAGCGTGGGCGCACCGCTGTCCGTCGCGGTGGTGGTCGGGC CCGTGACGATTCCTGAACTGGTCGACCGGCCTCAGCTCGTCACGCGCGTGTCGGGCAACGAAGTGAGGCTCGACGAATTC GCGCGCTGGGGCGAGCCGCTCAAGAGCGGTGTCGCCGACGTGATCGCCGCCGACCTGACGCGACTGCTCGGCTCGAAGCA GGTCTCGGTGTCGTCGCAAACGGTGGCGGGCACGGAGGCGTGTCGCGTGCGCGTCGATATCGTGCAGTTCGATTCGATGC CCGGCGAGGCCGTTGCTGTCGATGCATTGTGGACCGTGCGTGTGGCGGGCCGCACTACGCTGCTGACGGGCCGTTCGACG GTGCGCGAGCCGGTGCAGGGCACGGACGAAGCGGCGCTGGTCGCAGCGCATAGCCGGGCGCTCGCCGCCGTGAGCCGGGA GATTGCTGCGGCGATCAGGCGGGCGACGTGA
Upstream 100 bases:
>100_bases TCCGGGAACTCGCGCGTACGGCGGCATCGTTCCGTGCGCTTTCCGATTATCTGCAGCGCCATCCGGAAGCGCTGTTGCGC GGCAAACAGGAGGACGCAAA
Downstream 100 bases:
>100_bases TCGTCTTCTGGCTGCCGTTGTAGTCGAGCAGCTGAACTTCCATCATCGTTGCCGTGCCGTTGTTCTTCAGATTGCCGTCA GAGAGCGTGTTCGCGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MKRIEFARCASLCVVGMALLAACASPRSSFYTLSPDSTLESVGAPLSVAVVVGPVTIPELVDRPQLVTRVSGNEVRLDEF ARWGEPLKSGVADVIAADLTRLLGSKQVSVSSQTVAGTEACRVRVDIVQFDSMPGEAVAVDALWTVRVAGRTTLLTGRST VREPVQGTDEAALVAAHSRALAAVSREIAAAIRRAT
Sequences:
>Translated_196_residues MKRIEFARCASLCVVGMALLAACASPRSSFYTLSPDSTLESVGAPLSVAVVVGPVTIPELVDRPQLVTRVSGNEVRLDEF ARWGEPLKSGVADVIAADLTRLLGSKQVSVSSQTVAGTEACRVRVDIVQFDSMPGEAVAVDALWTVRVAGRTTLLTGRST VREPVQGTDEAALVAAHSRALAAVSREIAAAIRRAT >Mature_196_residues MKRIEFARCASLCVVGMALLAACASPRSSFYTLSPDSTLESVGAPLSVAVVVGPVTIPELVDRPQLVTRVSGNEVRLDEF ARWGEPLKSGVADVIAADLTRLLGSKQVSVSSQTVAGTEACRVRVDIVQFDSMPGEAVAVDALWTVRVAGRTTLLTGRST VREPVQGTDEAALVAAHSRALAAVSREIAAAIRRAT
Specific function: Unknown
COG id: COG3009
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20587; Mature: 20587
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIEFARCASLCVVGMALLAACASPRSSFYTLSPDSTLESVGAPLSVAVVVGPVTIPEL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCEEEEEEECCCCCHHH VDRPQLVTRVSGNEVRLDEFARWGEPLKSGVADVIAADLTRLLGSKQVSVSSQTVAGTEA HCCCHHEEECCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHH CRVRVDIVQFDSMPGEAVAVDALWTVRVAGRTTLLTGRSTVREPVQGTDEAALVAAHSRA HEEEEEEEEECCCCCCEEEEEHEEEEEECCCEEEEECCHHHHHCCCCCCCHHHHHHHHHH LAAVSREIAAAIRRAT HHHHHHHHHHHHHHCC >Mature Secondary Structure MKRIEFARCASLCVVGMALLAACASPRSSFYTLSPDSTLESVGAPLSVAVVVGPVTIPEL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCEEEEEEECCCCCHHH VDRPQLVTRVSGNEVRLDEFARWGEPLKSGVADVIAADLTRLLGSKQVSVSSQTVAGTEA HCCCHHEEECCCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHH CRVRVDIVQFDSMPGEAVAVDALWTVRVAGRTTLLTGRSTVREPVQGTDEAALVAAHSRA HEEEEEEEEECCCCCCEEEEEHEEEEEECCCEEEEECCHHHHHCCCCCCCHHHHHHHHHH LAAVSREIAAAIRRAT HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA