| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is bcr [H]
Identifier: 186475390
GI number: 186475390
Start: 700482
End: 701690
Strand: Direct
Name: bcr [H]
Synonym: Bphy_0624
Alternate gene names: 186475390
Gene position: 700482-701690 (Clockwise)
Preceding gene: 186475381
Following gene: 186475394
Centisome position: 20.13
GC content: 62.61
Gene sequence:
>1209_bases ATGTCTCACGACGTCAGATCCCGGCCCGACGCGCGGCTGATTCTGCTGCTCGGCGCGCTCGCCGCGTGCGGGCCGATTTC GATCGATATGTATCTGCCCAGCCTGCCGTCGATCACGCGAGCGTTCAGCGTCAGTGCGGGCGCCGCGCAGAGCACGCTGA CGAGCTTCATGCTCGGCTTCTCGATCGGCATGCTGCTGTATGGGCCGATGTCGGACGCATATGGGCGGCGTCCCGTGCTG CTCGGCGGCATTGTCATGTACACGCTCGCGACGATCGTTTGTGCGTTGTCGCCGTCGATCGGTTCGCTCATCACGTTCCG CTTCGTGCAGGCGCTCGGCGCGGGTGCTGCGTCGGTGCTGGCGCGTGCGATCGCCCGCGACGCGCATGGTCCTGCCGATG CAGCGCGTGTGCTGTCGATGCTTGCCATCGTCACGTCGATCGGACCGTTGCTTGCGCCGTTGATCGGCGGGCAGTTGCTG CTGCTGGGCGGCTGGCGGGTCGTCTTCATCGCGCTGACGATTTTCGGTGCGATATGCGCCGCGACTGCATTCATGCGGGT GCCGGAGACGTGGCCGCGGGAGAAGCGCGCACACGGTGCGGTGTTTCAGTCATTTGCCGCCTACGGCACGCTGCTGAAAG ACCCTGTGACCTGGGGGCACATGCTGTGCGGCGGCATGGCGTTCGCTTCCATGTTTGCCTATATCACGGCGACGCCGTTC GTTTATATCGAGTACTTCCATGTGTCTGCGCAGCACTATGGCTTTCTGTTCGGAATGAACATCGTCGGTATCATGCTCGG CAACTTCATCAACACACGGGTTGTCGGCCGCACGGGGCCGCTGCCCGTGATTTCCGTTGCTGCGTCGATCAGCTTCGTCG CTTCGTTGTTCGTCGCATTGATGTGTCTGACGGGGTGGGGCGGGTTGTGGTCGATCGTGGCCGGCTTGTTTTTCGTGGTC GGTGTGGTTGGCTTGCTGTCGGCCAATTGCACTACCGATCTGATGCACAGATATCCACGTAATGCCGGCGCGGCCGCGGC TGTGTTCGGGGCTGTGCAGTTGGCGTTAGGGGCTTTGTCTTCCTTGGCTGTCGGGCTTTGGCATGATGGATCGCCGCAAG GCATGGGGGTGACTATAGCGGTCGCCGGCTCTTTGTGCTTTGTTGGCAGGTTTCTGGTAGTGCGGTGGCATGGGAGGCCG GCGTTGTAG
Upstream 100 bases:
>100_bases TATGGGGCGTCGGTTACAATCGGGGGCCGTATCCGCAGCGCTGCACGGACCGCCGGTCCAGCATCGCCGTTCCTTGCGCG CTGCTTCTCACTGGAATTCC
Downstream 100 bases:
>100_bases TTGTTGTTGTCTGCGACGCCGTCGCCGTTCTCGCCTTTTCGCTGGCATCCGCGTGATGTTCTGGTTTGCCGGCGCTGCCA GCAAATCAAACATGCCACGC
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSHDVRSRPDARLILLLGALAACGPISIDMYLPSLPSITRAFSVSAGAAQSTLTSFMLGFSIGMLLYGPMSDAYGRRPVL LGGIVMYTLATIVCALSPSIGSLITFRFVQALGAGAASVLARAIARDAHGPADAARVLSMLAIVTSIGPLLAPLIGGQLL LLGGWRVVFIALTIFGAICAATAFMRVPETWPREKRAHGAVFQSFAAYGTLLKDPVTWGHMLCGGMAFASMFAYITATPF VYIEYFHVSAQHYGFLFGMNIVGIMLGNFINTRVVGRTGPLPVISVAASISFVASLFVALMCLTGWGGLWSIVAGLFFVV GVVGLLSANCTTDLMHRYPRNAGAAAAVFGAVQLALGALSSLAVGLWHDGSPQGMGVTIAVAGSLCFVGRFLVVRWHGRP AL
Sequences:
>Translated_402_residues MSHDVRSRPDARLILLLGALAACGPISIDMYLPSLPSITRAFSVSAGAAQSTLTSFMLGFSIGMLLYGPMSDAYGRRPVL LGGIVMYTLATIVCALSPSIGSLITFRFVQALGAGAASVLARAIARDAHGPADAARVLSMLAIVTSIGPLLAPLIGGQLL LLGGWRVVFIALTIFGAICAATAFMRVPETWPREKRAHGAVFQSFAAYGTLLKDPVTWGHMLCGGMAFASMFAYITATPF VYIEYFHVSAQHYGFLFGMNIVGIMLGNFINTRVVGRTGPLPVISVAASISFVASLFVALMCLTGWGGLWSIVAGLFFVV GVVGLLSANCTTDLMHRYPRNAGAAAAVFGAVQLALGALSSLAVGLWHDGSPQGMGVTIAVAGSLCFVGRFLVVRWHGRP AL >Mature_401_residues SHDVRSRPDARLILLLGALAACGPISIDMYLPSLPSITRAFSVSAGAAQSTLTSFMLGFSIGMLLYGPMSDAYGRRPVLL GGIVMYTLATIVCALSPSIGSLITFRFVQALGAGAASVLARAIARDAHGPADAARVLSMLAIVTSIGPLLAPLIGGQLLL LGGWRVVFIALTIFGAICAATAFMRVPETWPREKRAHGAVFQSFAAYGTLLKDPVTWGHMLCGGMAFASMFAYITATPFV YIEYFHVSAQHYGFLFGMNIVGIMLGNFINTRVVGRTGPLPVISVAASISFVASLFVALMCLTGWGGLWSIVAGLFFVVG VVGLLSANCTTDLMHRYPRNAGAAAAVFGAVQLALGALSSLAVGLWHDGSPQGMGVTIAVAGSLCFVGRFLVVRWHGRPA L
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=384, Percent_Identity=34.6354166666667, Blast_Score=235, Evalue=4e-63, Organism=Escherichia coli, GI48994889, Length=237, Percent_Identity=31.2236286919831, Blast_Score=124, Evalue=8e-30, Organism=Escherichia coli, GI87082312, Length=359, Percent_Identity=29.8050139275766, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1790146, Length=182, Percent_Identity=32.4175824175824, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1787065, Length=262, Percent_Identity=26.3358778625954, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1790794, Length=361, Percent_Identity=22.1606648199446, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790195, Length=137, Percent_Identity=29.1970802919708, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319657, Length=168, Percent_Identity=27.9761904761905, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324264, Length=161, Percent_Identity=27.9503105590062, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6325414, Length=123, Percent_Identity=28.4552845528455, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42108; Mature: 41977
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHDVRSRPDARLILLLGALAACGPISIDMYLPSLPSITRAFSVSAGAAQSTLTSFMLGF CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHH SIGMLLYGPMSDAYGRRPVLLGGIVMYTLATIVCALSPSIGSLITFRFVQALGAGAASVL HHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH ARAIARDAHGPADAARVLSMLAIVTSIGPLLAPLIGGQLLLLGGWRVVFIALTIFGAICA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHH ATAFMRVPETWPREKRAHGAVFQSFAAYGTLLKDPVTWGHMLCGGMAFASMFAYITATPF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCE VYIEYFHVSAQHYGFLFGMNIVGIMLGNFINTRVVGRTGPLPVISVAASISFVASLFVAL EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHH MCLTGWGGLWSIVAGLFFVVGVVGLLSANCTTDLMHRYPRNAGAAAAVFGAVQLALGALS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SLAVGLWHDGSPQGMGVTIAVAGSLCFVGRFLVVRWHGRPAL HHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure SHDVRSRPDARLILLLGALAACGPISIDMYLPSLPSITRAFSVSAGAAQSTLTSFMLGF CCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHH SIGMLLYGPMSDAYGRRPVLLGGIVMYTLATIVCALSPSIGSLITFRFVQALGAGAASVL HHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH ARAIARDAHGPADAARVLSMLAIVTSIGPLLAPLIGGQLLLLGGWRVVFIALTIFGAICA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHH ATAFMRVPETWPREKRAHGAVFQSFAAYGTLLKDPVTWGHMLCGGMAFASMFAYITATPF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCE VYIEYFHVSAQHYGFLFGMNIVGIMLGNFINTRVVGRTGPLPVISVAASISFVASLFVAL EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHH MCLTGWGGLWSIVAGLFFVVGVVGLLSANCTTDLMHRYPRNAGAAAAVFGAVQLALGALS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH SLAVGLWHDGSPQGMGVTIAVAGSLCFVGRFLVVRWHGRPAL HHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]