Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475364

Identifier: 186475364

GI number: 186475364

Start: 674491

End: 675579

Strand: Direct

Name: 186475364

Synonym: Bphy_0597

Alternate gene names: NA

Gene position: 674491-675579 (Clockwise)

Preceding gene: 186475362

Following gene: 186475368

Centisome position: 19.39

GC content: 65.75

Gene sequence:

>1089_bases
GTGCGTGTCGTGGATCGCGGCTACAATGCGTCCACGATGAAAGCGACACGAAATTTGCGCAGGCCGCGGGTTCTGATCGT
CGGTTGCGGCGATGTCGGCATGCGCTGTGTGCGGCAACTACAAGGACGCGCGCGTCTTTTTGCGCTTACGAGCCACGCCG
AACGCCGCGACGAACTGCGCGCGGCGGGCGTGACGCCGATCGTCGGCGATCTCGACGTGCGCGCGAGTCTCTCGCGCATT
GCCCGTCTCGCACCGACTGTGCTGCACCTCGCGCCTCCGCAAAAAAGCGGTGATGCGGACACGCGCACGCGTTCGCTGAT
CGCCACCTTGACGGCGTCTCGCATCCGTCATGCCCGTCATGTTGCAGCGGGGCGTCTCAGACGCGCGCAGCACGGCATTC
GTGCTCGCAAAACATCCGGTATTGTACCCGACGGAGGTAACCCGTCTCTGCGGGCCGGCCATGACGGGGACAAGCGTTTG
CGCGTCGTGTATGCGAGCACCACAGGCGTGTACGGCGATTGCAACGGAGCGTGGCTCGATGAAACGCGCCCCGTCGCGCC
TGCCAACGAGCGCGCGAAACGTCGCGTGTCGGCCGAAAGGCAATTGCGGCGGGCTGCGGCGCGGCGCGTGCTCACCGCGA
GCATCGCGCGCATTCCGGGCATCTATGCGAGTAACCGGCTACCCCTTGCGCGGCTGGAGAAGCGCACGCCCGCGCTCATC
GACGAAGACGACGTCTACACGAACCACATCCATGCCGACGACCTCGCCGCGATCCTGCTGCGCATGGCGACGCATGGCCG
GCCGTCGCGCGTGCTCCACGCCAGCGACGACACGACGCTGAAAATGGGCGAATACTTCGATCGCGTAGCCGATGCGTTCG
GCGTCGAACGCGCACCGCGCATCTCGCGCGACGAAGCTGAACAGCAACTCGGGGAGATGATGCTGTCGTTCATGCGCGAA
TCGCGGCGCCTGATCAACACGCGCCTGAAGCGCGAACTGCAGATGCAGTTGCGCTATCCGCACGTCGACGACTTTCTGCG
CACAGCGACCGCCCGGCCGGAAACGCTATCTGGCGCGGGCAAGCCGTGA

Upstream 100 bases:

>100_bases
GGGTTCGTCGGGTTCCACCTGAAACTGCCGGCCGCTTTGCCGGAGCGTTACGTTAAATGCCATATGCGTTCGATCTTCGA
ATACAGGGAGTCGGTAACCA

Downstream 100 bases:

>100_bases
CGGAAAGCACAGTCAGATGATCAGGTAAGAGCAGGTAGCGCTTCCAGTAGCAGGAAGCAACAGAACGCGCCGATCAATGC
GGCGATCAGGTTCGGCTCAT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NAD-Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Epimerase/Dehydratase-Like Protein

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELRAAGVTPIVGDLDVRASLSRI
ARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARHVAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRL
RVVYASTTGVYGDCNGAWLDETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI
DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPRISRDEAEQQLGEMMLSFMRE
SRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAGKP

Sequences:

>Translated_362_residues
MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELRAAGVTPIVGDLDVRASLSRI
ARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARHVAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRL
RVVYASTTGVYGDCNGAWLDETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI
DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPRISRDEAEQQLGEMMLSFMRE
SRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAGKP
>Mature_362_residues
MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELRAAGVTPIVGDLDVRASLSRI
ARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARHVAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRL
RVVYASTTGVYGDCNGAWLDETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI
DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPRISRDEAEQQLGEMMLSFMRE
SRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAGKP

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40281; Mature: 40281

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELR
CCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHH
AAGVTPIVGDLDVRASLSRIARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARH
HCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRLRVVYASTTGVYGDCNGAWLD
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
ETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC
DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPR
CCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCCC
ISRDEAEQQLGEMMLSFMRESRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
KP
CC
>Mature Secondary Structure
MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELR
CCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHH
AAGVTPIVGDLDVRASLSRIARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARH
HCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRLRVVYASTTGVYGDCNGAWLD
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
ETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC
DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPR
CCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCCC
ISRDEAEQQLGEMMLSFMRESRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC
KP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA