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The map label for this gene is fecI [C]

Identifier: 186475313

GI number: 186475313

Start: 616193

End: 617152

Strand: Direct

Name: fecI [C]

Synonym: Bphy_0545

Alternate gene names: 186475313

Gene position: 616193-617152 (Clockwise)

Preceding gene: 186475311

Following gene: 186475317

Centisome position: 17.71

GC content: 67.29

Gene sequence:

>960_bases
ATGGAACAGATGCACAGAGAGAAGCGGGCGGAATTCGAGGCGGTGCGCGCGAAGCTGTTCGCGCTCGTGTACCGGATGCT
CGGCAGCCGCGCGGAAGCGGAAGATGTCGTGCAGGACGCCTGGCTCAAATGGCATGTCGCCGACGCGAGCAAACTGCGCT
CGTCGGGCGCGTGGCTCACGACGATCACGACGCGGCTCGCGATCGACCGGCTGCGTCATCTGCAGATCGAGCGCGCGACG
CGCTCGGGCGGCTGGATGCCCGACCCGTGGATCGAAGGCCTCGCGCCTTCGGCGGAAGACCTGGCGTTGCGGGCCGTGCA
GATGTCGTACGGCGTGATGCTGCTGCTCGAACGCCTGAAGCCGGAAGAGCGCGCCGCGTTCGTGCTGCACGAGGCGTTCG
AATGCGACTACGCGGAAATCGCGAAGATCCTCGCGAAGACACCCGCCAACTGCCGGCAGATGGTGCATCGCGCGAAAGAA
CGCCTGCAGCGCCAAGGCGTGCCGGCGAAGCGGGCCGATCCCGCGGCGCACGCGCGCATCGTCGAGCGTTTGCGGGCGGC
AATGGAGGCGCAGGATCGCGTGGGCCTCGTGCGCCTTTTCTGCGACGTGCCGAGCGTAATCAGCGATGCACCCGAAACCG
TCGACGCCGTCGCGACGGCGGATCAGATAGCGACCACGCTGTCGATGCGCGGCCCGGGCGATCAGATGGAGACGGTGTCG
ATGAACGGCATGAGTGCCGTCGCGTGGATGCGCAATGGCGAGGTCGACGCGTTGCTGGACATTTCGATCGGCGAGGACGA
GCGGATTGTCGCGCTGCGCATCGTGACGGGCGCGCTGCGGCTTGCGCCGGCAACGCGGGTGTTCGGACGCGCGGCGATCA
TGCGGCTGCTGCAGCCCGTCAGCAGCCAGGCGGCGTCAGTTACGATGCGCGGCCACTTCCCAGTTGATATCGACGCATAG

Upstream 100 bases:

>100_bases
AAAGCGGGACGCAGCGTGACAAAAGAATGTTTGCGTCGACGTGTCACATCGCGGGCCGTCTGCCCGTCTAGCGGATGACC
CAGTCACAGGAGCGGCACGC

Downstream 100 bases:

>100_bases
CACCTGCATGCCGCGCGCCGTTTCAGCCGCAATCGATGCCGTCACGCACAGGTGCGCTTCGTTGATCGACAGATAGGGCG
GCGTCAGATGCACCTGGCCG

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma Factor; RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma Factor; Sigma-; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma Factor; ECF Family RNA Polymerase Sigma Factor; ECF-Sigma Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF Sigma Factor; RNA Polymerase; Sigma-70 Factor; AlteRNAtive RNA Polymerase Sigma Factor; Sigma Factor Sigma; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma Factor Sigma-70 Family; ECF-Family RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; RNA Polymerase Sigma Factor Protein; ECF-Family Protein RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MEQMHREKRAEFEAVRAKLFALVYRMLGSRAEAEDVVQDAWLKWHVADASKLRSSGAWLTTITTRLAIDRLRHLQIERAT
RSGGWMPDPWIEGLAPSAEDLALRAVQMSYGVMLLLERLKPEERAAFVLHEAFECDYAEIAKILAKTPANCRQMVHRAKE
RLQRQGVPAKRADPAAHARIVERLRAAMEAQDRVGLVRLFCDVPSVISDAPETVDAVATADQIATTLSMRGPGDQMETVS
MNGMSAVAWMRNGEVDALLDISIGEDERIVALRIVTGALRLAPATRVFGRAAIMRLLQPVSSQAASVTMRGHFPVDIDA

Sequences:

>Translated_319_residues
MEQMHREKRAEFEAVRAKLFALVYRMLGSRAEAEDVVQDAWLKWHVADASKLRSSGAWLTTITTRLAIDRLRHLQIERAT
RSGGWMPDPWIEGLAPSAEDLALRAVQMSYGVMLLLERLKPEERAAFVLHEAFECDYAEIAKILAKTPANCRQMVHRAKE
RLQRQGVPAKRADPAAHARIVERLRAAMEAQDRVGLVRLFCDVPSVISDAPETVDAVATADQIATTLSMRGPGDQMETVS
MNGMSAVAWMRNGEVDALLDISIGEDERIVALRIVTGALRLAPATRVFGRAAIMRLLQPVSSQAASVTMRGHFPVDIDA
>Mature_319_residues
MEQMHREKRAEFEAVRAKLFALVYRMLGSRAEAEDVVQDAWLKWHVADASKLRSSGAWLTTITTRLAIDRLRHLQIERAT
RSGGWMPDPWIEGLAPSAEDLALRAVQMSYGVMLLLERLKPEERAAFVLHEAFECDYAEIAKILAKTPANCRQMVHRAKE
RLQRQGVPAKRADPAAHARIVERLRAAMEAQDRVGLVRLFCDVPSVISDAPETVDAVATADQIATTLSMRGPGDQMETVS
MNGMSAVAWMRNGEVDALLDISIGEDERIVALRIVTGALRLAPATRVFGRAAIMRLLQPVSSQAASVTMRGHFPVDIDA

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35373; Mature: 35373

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQMHREKRAEFEAVRAKLFALVYRMLGSRAEAEDVVQDAWLKWHVADASKLRSSGAWLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCHHHHHCCCCCHH
TITTRLAIDRLRHLQIERATRSGGWMPDPWIEGLAPSAEDLALRAVQMSYGVMLLLERLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PEERAAFVLHEAFECDYAEIAKILAKTPANCRQMVHRAKERLQRQGVPAKRADPAAHARI
CHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VERLRAAMEAQDRVGLVRLFCDVPSVISDAPETVDAVATADQIATTLSMRGPGDQMETVS
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
MNGMSAVAWMRNGEVDALLDISIGEDERIVALRIVTGALRLAPATRVFGRAAIMRLLQPV
CCCCHHHHHHCCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SSQAASVTMRGHFPVDIDA
CCHHHEEEEECCCCCCCCC
>Mature Secondary Structure
MEQMHREKRAEFEAVRAKLFALVYRMLGSRAEAEDVVQDAWLKWHVADASKLRSSGAWLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCHHHHHCCCCCHH
TITTRLAIDRLRHLQIERATRSGGWMPDPWIEGLAPSAEDLALRAVQMSYGVMLLLERLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PEERAAFVLHEAFECDYAEIAKILAKTPANCRQMVHRAKERLQRQGVPAKRADPAAHARI
CHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VERLRAAMEAQDRVGLVRLFCDVPSVISDAPETVDAVATADQIATTLSMRGPGDQMETVS
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
MNGMSAVAWMRNGEVDALLDISIGEDERIVALRIVTGALRLAPATRVFGRAAIMRLLQPV
CCCCHHHHHHCCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
SSQAASVTMRGHFPVDIDA
CCHHHEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA