Click here to switch to the map view.

The map label for this gene is 186475311

Identifier: 186475311

GI number: 186475311

Start: 614747

End: 615358

Strand: Direct

Name: 186475311

Synonym: Bphy_0543

Alternate gene names: NA

Gene position: 614747-615358 (Clockwise)

Preceding gene: 186475308

Following gene: 186475313

Centisome position: 17.67

GC content: 63.24

Gene sequence:

>612_bases
ATGAGTCTCGCCTCAGATAATCAAAAGATGCGGCGCATCCCGCGACAGGAACGTGCGGCAAAACGTGTTGACGCGCTGCT
CGACGCGGCGGGCGACGTCATTGCTGAACGCGGCTTCGACGCCGCGACGATGACCGCGATCGCCGAACGGGCGGGCACGT
CGATCGGCGCCGTGTATCAATACTTTCCGAACAAGGATGCGCTTGTTTTCGCGCTGCGCACGCGCTACGGCGACGAAATG
GAAGCGCAATGGAGCGCGCTCGGCGACGCGGCGCAGGATTGCAGCGTCGACGAACTGGTCGATCGCATTTTCGCGCTGAT
GACGGACTTCATGGCGTCGCGGCCCGCGTATCTGCCGCTGTTGTCGGTGACATTGAATTTCAGGCGCGATGCCGCCGCGC
GCAACCGCTTGCGCGGCAGGTTCGCCGAATCGTTTCAGCGCTACAACCCCGCGCTGGCCGATGCCGATGCATTTCGCGTC
GCCGAGGTTGCGCTGCAGGTCGTGAAGAGTCTGAATCCGCTGTATGCGGCCGCGAAGCCGAAAGAGCGCAAGGCGCTGGT
CGACGAATACAAGCTGGCCGTGTCGTCGTATCTCGCCACGCGTCTGGGCTGA

Upstream 100 bases:

>100_bases
CGATCAGTACGAGCGCCGTGCTGCGCGGATCGATGGAAAGCGCTTGCGTCATGCGTCACCTGTATGTGAGGATGTCCTCA
TGTCATGATAATCGATAAAT

Downstream 100 bases:

>100_bases
AACATCCGCAGACAACGCGCGTCAGGTCGTGCCGTGAAGCGCGTCGACGGGAAGCGGCACGCGGGTCGTCAGCACATCGT
CGACGAGACCGTAGGTTTTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; TetR Family Transcriptional Regulatory Protein; Transcription Regulator Protein; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator TetR Family Protein; HTH-Type Transcriptional Regulator BetI; Transcriptional Regulator Protein; TetR Family Regulatory

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSLASDNQKMRRIPRQERAAKRVDALLDAAGDVIAERGFDAATMTAIAERAGTSIGAVYQYFPNKDALVFALRTRYGDEM
EAQWSALGDAAQDCSVDELVDRIFALMTDFMASRPAYLPLLSVTLNFRRDAAARNRLRGRFAESFQRYNPALADADAFRV
AEVALQVVKSLNPLYAAAKPKERKALVDEYKLAVSSYLATRLG

Sequences:

>Translated_203_residues
MSLASDNQKMRRIPRQERAAKRVDALLDAAGDVIAERGFDAATMTAIAERAGTSIGAVYQYFPNKDALVFALRTRYGDEM
EAQWSALGDAAQDCSVDELVDRIFALMTDFMASRPAYLPLLSVTLNFRRDAAARNRLRGRFAESFQRYNPALADADAFRV
AEVALQVVKSLNPLYAAAKPKERKALVDEYKLAVSSYLATRLG
>Mature_202_residues
SLASDNQKMRRIPRQERAAKRVDALLDAAGDVIAERGFDAATMTAIAERAGTSIGAVYQYFPNKDALVFALRTRYGDEME
AQWSALGDAAQDCSVDELVDRIFALMTDFMASRPAYLPLLSVTLNFRRDAAARNRLRGRFAESFQRYNPALADADAFRVA
EVALQVVKSLNPLYAAAKPKERKALVDEYKLAVSSYLATRLG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22478; Mature: 22347

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLASDNQKMRRIPRQERAAKRVDALLDAAGDVIAERGFDAATMTAIAERAGTSIGAVYQ
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH
YFPNKDALVFALRTRYGDEMEAQWSALGDAAQDCSVDELVDRIFALMTDFMASRPAYLPL
HCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH
LSVTLNFRRDAAARNRLRGRFAESFQRYNPALADADAFRVAEVALQVVKSLNPLYAAAKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCC
KERKALVDEYKLAVSSYLATRLG
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLASDNQKMRRIPRQERAAKRVDALLDAAGDVIAERGFDAATMTAIAERAGTSIGAVYQ
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHH
YFPNKDALVFALRTRYGDEMEAQWSALGDAAQDCSVDELVDRIFALMTDFMASRPAYLPL
HCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH
LSVTLNFRRDAAARNRLRGRFAESFQRYNPALADADAFRVAEVALQVVKSLNPLYAAAKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCC
KERKALVDEYKLAVSSYLATRLG
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA