BacMap

Definition	Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession	NC_010622
Length	3,479,187

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The map label for this gene is fabG [H]

Identifier: 186475273

GI number: 186475273

Start: 577351

End: 578091

Strand: Direct

Name: fabG [H]

Synonym: Bphy_0505

Alternate gene names: 186475273

Gene position: 577351-578091 (Clockwise)

Preceding gene: 186475272

Following gene: 186475277

Centisome position: 16.59

GC content: 59.51

Gene sequence:

>741_bases
ATGAACATGACCTTTGATTTTTCCGGTCGCTCGATACTCGTGACGGGCGCATCGAGCGGCATCGGCCGCACCACGGTCGA
GCTGTTGTGCGCAAGCGGCGCGCAGGTTGTGGCGGCGGCGCGCAATGTGGGTGAGTTGGCGCGGCTTGCCGAGGAGGCGG
GCTGTGAGCCGTTGGTGCTCGATGTCGGCAACGAGCACGCCATTGACGAAGCGTTGGGTTCGCTCGATGTCGTCTTCGAT
GGCCTTGTGAATTGTGCGGGCACGACGGTGCTCGAGCGTGCGATCGACACGACGGCAGCGAGCTTCGATAACGTGATGAA
TGTGAATGCGCGCGGCGCGGCTTTAGTGGCGCGGCATGTTGCGCGTGGGATGATCGGCGCTCGGCGCGCGGGCAGTATTG
TCAATGTGTCTAGCCAGGCGGCGCTCGTGGGCCTTGAGGATCATCTGAGCTATTGCGCGTCTAAAGCGGCTATGGATGCC
ATTACTCGTGTTTTATGTGTTGAACTTGGGGGGCATGGCATTCGCGTGAATAGCGTGAATCCAACCGTTACCTTGACGCC
GATGGCAGTGAAGGCCTGGAGCGAGCCTTTCAAGCGTGATCCGGCTTTGCAGGCGATTCCGTTGAAGCGGTTCGCTGAAC
CGCGAGAAGTCGCTGAGCCGATTTTGTTTTTGCTGAGCGATGCTGCTTCCATGATCAGTGGTGTTGCCTTACCGATTGAT
GGCGGCTACACCGCGAGGTAA

Upstream 100 bases:

>100_bases
AGCCCGATGCGGCGCGACAGGCGATGTACGCGGAGCGCTTCGGCATTTATACGGAACTGTATCCGGCGTTGAAGCCGGTC
ATGCATCGACTGCAAGCAAA

Downstream 100 bases:

>100_bases
ATGTTTTTCGCTGCATCCGCGTGATCTCCGCGCACTTCATGCGTTGCCCGTGCAGGCAACGCTAGCACCACGCAGATACC
ACGCGGATACTACGCAGATG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNMTFDFSGRSILVTGASSGIGRTTVELLCASGAQVVAAARNVGELARLAEEAGCEPLVLDVGNEHAIDEALGSLDVVFD
GLVNCAGTTVLERAIDTTAASFDNVMNVNARGAALVARHVARGMIGARRAGSIVNVSSQAALVGLEDHLSYCASKAAMDA
ITRVLCVELGGHGIRVNSVNPTVTLTPMAVKAWSEPFKRDPALQAIPLKRFAEPREVAEPILFLLSDAASMISGVALPID
GGYTAR

Sequences:

>Translated_246_residues
MNMTFDFSGRSILVTGASSGIGRTTVELLCASGAQVVAAARNVGELARLAEEAGCEPLVLDVGNEHAIDEALGSLDVVFD
GLVNCAGTTVLERAIDTTAASFDNVMNVNARGAALVARHVARGMIGARRAGSIVNVSSQAALVGLEDHLSYCASKAAMDA
ITRVLCVELGGHGIRVNSVNPTVTLTPMAVKAWSEPFKRDPALQAIPLKRFAEPREVAEPILFLLSDAASMISGVALPID
GGYTAR
>Mature_246_residues
MNMTFDFSGRSILVTGASSGIGRTTVELLCASGAQVVAAARNVGELARLAEEAGCEPLVLDVGNEHAIDEALGSLDVVFD
GLVNCAGTTVLERAIDTTAASFDNVMNVNARGAALVARHVARGMIGARRAGSIVNVSSQAALVGLEDHLSYCASKAAMDA
ITRVLCVELGGHGIRVNSVNPTVTLTPMAVKAWSEPFKRDPALQAIPLKRFAEPREVAEPILFLLSDAASMISGVALPID
GGYTAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=244, Percent_Identity=45.4918032786885, Blast_Score=201, Evalue=7e-52,
Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=33.1983805668016, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=30.7086614173228, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI40254992, Length=234, Percent_Identity=32.4786324786325, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI66933014, Length=243, Percent_Identity=30.0411522633745, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI10190704, Length=241, Percent_Identity=31.1203319502075, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=28.4552845528455, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI4503817, Length=193, Percent_Identity=32.1243523316062, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI209862901, Length=233, Percent_Identity=30.0429184549356, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI19923983, Length=233, Percent_Identity=30.0429184549356, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI126723750, Length=246, Percent_Identity=25.2032520325203, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI109715829, Length=247, Percent_Identity=27.5303643724696, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI59889578, Length=173, Percent_Identity=28.3236994219653, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=28.8537549407115, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=35.3909465020576, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1790717, Length=263, Percent_Identity=31.9391634980989, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=32.295719844358, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=27.6264591439689, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=30.4526748971193, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=31.3725490196078, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=29.8804780876494, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=28.4552845528455, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787820, Length=176, Percent_Identity=31.25, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787905, Length=253, Percent_Identity=32.0158102766798, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789057, Length=185, Percent_Identity=28.6486486486486, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789378, Length=239, Percent_Identity=27.6150627615063, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=46.5863453815261, Blast_Score=201, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=32.3886639676113, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=34.0080971659919, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI72000259, Length=270, Percent_Identity=32.2222222222222, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17560220, Length=269, Percent_Identity=31.5985130111524, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=32.824427480916, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=32.3076923076923, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=32.824427480916, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=29.2490118577075, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=30.8270676691729, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=32.2709163346614, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=30.3030303030303, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=30.9433962264151, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=30.188679245283, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=29.6442687747036, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=29.8850574712644, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=26.4822134387352, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=32.8358208955224, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17544670, Length=278, Percent_Identity=29.4964028776978, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=32.3076923076923, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=25.6916996047431, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=29.3233082706767, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17538480, Length=273, Percent_Identity=29.6703296703297, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=267, Percent_Identity=27.3408239700375, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=27.2373540856031, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=247, Percent_Identity=28.3400809716599, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17561272, Length=223, Percent_Identity=24.6636771300448, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=28.8537549407115, Blast_Score=82, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6322067, Length=172, Percent_Identity=33.1395348837209, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=39.7540983606557, Blast_Score=165, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=35.655737704918, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=36.4341085271318, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=34.8, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24644339, Length=260, Percent_Identity=35, Blast_Score=111, Evalue=4e-25,
Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=33.7301587301587, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24644337, Length=257, Percent_Identity=34.2412451361868, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17737361, Length=247, Percent_Identity=31.5789473684211, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=27.6679841897233, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28571387, Length=196, Percent_Identity=30.1020408163265, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21357673, Length=223, Percent_Identity=26.0089686098655, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI21358495, Length=198, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24641232, Length=239, Percent_Identity=29.2887029288703, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356301, Length=194, Percent_Identity=29.3814432989691, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25546; Mature: 25546

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMTFDFSGRSILVTGASSGIGRTTVELLCASGAQVVAAARNVGELARLAEEAGCEPLVL
CCCEEECCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
DVGNEHAIDEALGSLDVVFDGLVNCAGTTVLERAIDTTAASFDNVMNVNARGAALVARHV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
ARGMIGARRAGSIVNVSSQAALVGLEDHLSYCASKAAMDAITRVLCVELGGHGIRVNSVN
HHHHHHHHHCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
PTVTLTPMAVKAWSEPFKRDPALQAIPLKRFAEPREVAEPILFLLSDAASMISGVALPID
CEEEECHHHHHHHHHHHHCCCCCEECCHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEC
GGYTAR
CCCCCC
>Mature Secondary Structure
MNMTFDFSGRSILVTGASSGIGRTTVELLCASGAQVVAAARNVGELARLAEEAGCEPLVL
CCCEEECCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEE
DVGNEHAIDEALGSLDVVFDGLVNCAGTTVLERAIDTTAASFDNVMNVNARGAALVARHV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH
ARGMIGARRAGSIVNVSSQAALVGLEDHLSYCASKAAMDAITRVLCVELGGHGIRVNSVN
HHHHHHHHHCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
PTVTLTPMAVKAWSEPFKRDPALQAIPLKRFAEPREVAEPILFLLSDAASMISGVALPID
CEEEECHHHHHHHHHHHHCCCCCEECCHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEC
GGYTAR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]