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The map label for this gene is rhaS [C]

Identifier: 186475267

GI number: 186475267

Start: 569948

End: 570967

Strand: Direct

Name: rhaS [C]

Synonym: Bphy_0499

Alternate gene names: 186475267

Gene position: 569948-570967 (Clockwise)

Preceding gene: 186475263

Following gene: 186475268

Centisome position: 16.38

GC content: 62.55

Gene sequence:

>1020_bases
GTGCAACCCGATCTCGAACTGGTCACCGTGCGCCGCGACGAGTCGTTCAAGGCGTGGTATCACGGCTTTCCATACCGCAC
GGTGCGCTGGCACTTCCACCCGGAATTTGAAATCCATCTGATCGTTGCGACGACGGGCAAGATGTTTGTCGGCGATTACA
TCGGTCCTTTTGCGCCCGGCAATCTCGTGCTGATGGGCCCGAATCTGCCGCACAACTGGGTGAGCGAAGTGCCCGAAGGC
GTGACGATCGAACAGCGCAATCTCGTCGTACAGTTCCCGCAGGACTTCGTCGCGCATTGCACGCAGAGCTTCCCCGAGTG
GCGCACGCTCGAAGCGCTGCTGGCGGATTCGCGGCGCGGCGTGTCGTTCGGCGCGCAGACCAGCGCGAAGATCCAGCCGC
TCTTCATGGAACTGCTCGACGCGCGCGGCCTGCGCCGTATCGTGCTGTTCTTGTCGATGATGGAAATCCTGCTGAATGCG
AGCGACCGCGAACTGCTTGCGAGCCCCGCGTATCAGATCGACCCGACCAGCTACGCGTCGACGCGCATCAATCACGTGCT
GTCGTATATCGGTAAAAACCTTTCATCGGAACTGCGCGAGTCCGAACTCGCTCAGCTCGCCGGCCAGAGCGTGAGCGCAT
TCTCGCGATACTTTCGCCGGCATACTGGCCTGACGTTCGTGCAGTACGTCAACCGGATGCGCATCAACCTCGCCTGCCAG
CTGCTGATGGACGATGAGCTGAGCGTCACCGACATCTGCTACAAGGTCGGCTTCAACAATCTGTCGAACTTCAACCGGCA
GTTTCTTACCGCGAAGGGCATGGCCCCGTCGAAGTTCCGCCGCTTCCAGCAACTGAACGACGCGAGCCGCGTCGCTTCCG
AAGCGGCAGCGGCGCAAGGCAAGGGCATCGCCAATGCGCCCTCGATCGTGCCCGCCGCGCAAACGCAGGTTCATGCGCAC
GGCCAGCCGCGCGCCGCACCCGCGCATCCGCCTCGCGGTTCGCCGCTGCCGACGAACTAG

Upstream 100 bases:

>100_bases
ATGAAGGGCATCGTCATGCCGGTTACCTGGTTGCACGTGCATCGACCTGCGTGTCGATGTGCGCAGCCGGGCCGCTGAGC
CGTTGCATCGGGAGACCGAC

Downstream 100 bases:

>100_bases
GGCACCCCAGCAATCCCGACGTTTCACCTCCTCATCGCGCTTCAGACAGCGCGAGGGAAGCACTCATCCTCATAAACGGA
GACAAACCATGACGCATAGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator Arac Family; Activator Protein MtlR; Transcriptional Regulator AraC Family Protein; AraC Family Regulatory Protein; AraC Family Transcription Regulator; Two Component Transcriptional Regulator AraC Family; Transcriptional Regulator Protein; Response Regulator Receiver Protein; Transcriptional Regulator MtlR; Two-Component Response Regulator; Activator Protein; Transcriptional Activator MltR; Response Regulator; Helix-Turn-Helix AraC Type; AraC Family Transcription Regulator Protein; Transcriptional Regulator With PAS/PAC Sensors AraC Family; Transcriptional Activator; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator AraC/XylS Family; HTH-Type Transcriptional Regulator AraC-Family; 2-Isopropylmalate Synthase; Two Component Transcriptional Regulator Arac Family; Helix-Turn-Helix Domain-Containing Protein AraC Type; Transcriptional Regulator Protein AraC Family; Helix-Turn-Helix Protein; Two Component AraC Family Transcriptional Regulator; Xylan 1 4-Beta-Xylosidase

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MQPDLELVTVRRDESFKAWYHGFPYRTVRWHFHPEFEIHLIVATTGKMFVGDYIGPFAPGNLVLMGPNLPHNWVSEVPEG
VTIEQRNLVVQFPQDFVAHCTQSFPEWRTLEALLADSRRGVSFGAQTSAKIQPLFMELLDARGLRRIVLFLSMMEILLNA
SDRELLASPAYQIDPTSYASTRINHVLSYIGKNLSSELRESELAQLAGQSVSAFSRYFRRHTGLTFVQYVNRMRINLACQ
LLMDDELSVTDICYKVGFNNLSNFNRQFLTAKGMAPSKFRRFQQLNDASRVASEAAAAQGKGIANAPSIVPAAQTQVHAH
GQPRAAPAHPPRGSPLPTN

Sequences:

>Translated_339_residues
MQPDLELVTVRRDESFKAWYHGFPYRTVRWHFHPEFEIHLIVATTGKMFVGDYIGPFAPGNLVLMGPNLPHNWVSEVPEG
VTIEQRNLVVQFPQDFVAHCTQSFPEWRTLEALLADSRRGVSFGAQTSAKIQPLFMELLDARGLRRIVLFLSMMEILLNA
SDRELLASPAYQIDPTSYASTRINHVLSYIGKNLSSELRESELAQLAGQSVSAFSRYFRRHTGLTFVQYVNRMRINLACQ
LLMDDELSVTDICYKVGFNNLSNFNRQFLTAKGMAPSKFRRFQQLNDASRVASEAAAAQGKGIANAPSIVPAAQTQVHAH
GQPRAAPAHPPRGSPLPTN
>Mature_339_residues
MQPDLELVTVRRDESFKAWYHGFPYRTVRWHFHPEFEIHLIVATTGKMFVGDYIGPFAPGNLVLMGPNLPHNWVSEVPEG
VTIEQRNLVVQFPQDFVAHCTQSFPEWRTLEALLADSRRGVSFGAQTSAKIQPLFMELLDARGLRRIVLFLSMMEILLNA
SDRELLASPAYQIDPTSYASTRINHVLSYIGKNLSSELRESELAQLAGQSVSAFSRYFRRHTGLTFVQYVNRMRINLACQ
LLMDDELSVTDICYKVGFNNLSNFNRQFLTAKGMAPSKFRRFQQLNDASRVASEAAAAQGKGIANAPSIVPAAQTQVHAH
GQPRAAPAHPPRGSPLPTN

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38013; Mature: 38013

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPDLELVTVRRDESFKAWYHGFPYRTVRWHFHPEFEIHLIVATTGKMFVGDYIGPFAPG
CCCCCEEEEEECCCCHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCHHHHCCCCCCCC
NLVLMGPNLPHNWVSEVPEGVTIEQRNLVVQFPQDFVAHCTQSFPEWRTLEALLADSRRG
CEEEECCCCCHHHHHHCCCCCEEECCCEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCC
VSFGAQTSAKIQPLFMELLDARGLRRIVLFLSMMEILLNASDRELLASPAYQIDPTSYAS
CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHH
TRINHVLSYIGKNLSSELRESELAQLAGQSVSAFSRYFRRHTGLTFVQYVNRMRINLACQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEE
LLMDDELSVTDICYKVGFNNLSNFNRQFLTAKGMAPSKFRRFQQLNDASRVASEAAAAQG
EEECCCCCHHHHHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KGIANAPSIVPAAQTQVHAHGQPRAAPAHPPRGSPLPTN
CCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPDLELVTVRRDESFKAWYHGFPYRTVRWHFHPEFEIHLIVATTGKMFVGDYIGPFAPG
CCCCCEEEEEECCCCHHHHHCCCCCEEEEEEECCCEEEEEEEEECCCCHHHHCCCCCCCC
NLVLMGPNLPHNWVSEVPEGVTIEQRNLVVQFPQDFVAHCTQSFPEWRTLEALLADSRRG
CEEEECCCCCHHHHHHCCCCCEEECCCEEEECCHHHHHHHHHCCCCHHHHHHHHHCCCCC
VSFGAQTSAKIQPLFMELLDARGLRRIVLFLSMMEILLNASDRELLASPAYQIDPTSYAS
CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHH
TRINHVLSYIGKNLSSELRESELAQLAGQSVSAFSRYFRRHTGLTFVQYVNRMRINLACQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEE
LLMDDELSVTDICYKVGFNNLSNFNRQFLTAKGMAPSKFRRFQQLNDASRVASEAAAAQG
EEECCCCCHHHHHHHHCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
KGIANAPSIVPAAQTQVHAHGQPRAAPAHPPRGSPLPTN
CCCCCCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA