| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is frmB [H]
Identifier: 186475252
GI number: 186475252
Start: 552681
End: 553526
Strand: Direct
Name: frmB [H]
Synonym: Bphy_0484
Alternate gene names: 186475252
Gene position: 552681-553526 (Clockwise)
Preceding gene: 186475251
Following gene: 186475257
Centisome position: 15.89
GC content: 64.3
Gene sequence:
>846_bases ATGCTCGAACTGATCGAATCGCACGCGTCGTTCGGCGGCACGCAGCGTATCTACAGCCACGAGTCGAAGGCGATCGGCTT GCCGATGCGCTTTTCCGTCTTCATGCCGAAAGAGGCGTCGCAGAAGAAGGTGCCGGCGCTGTTTTATCTGGCCGGGCTGA CCTGCACCGAAGAGACGTTTCCGATCAAGGCGGGCGCGCAGCGCTTCGCCGCACAGCACGGCATCGCGCTGATCGCGCCC GACACCAGTCCGCGCGGCGCAGGCGTGCCGGGCGAGACGGACTCGTGGGACTTCGGCGTCGGCGCGGGCTTCTACGTCGA TGCGACGCAGGAACCCTGGTCGAAGCACTATCGGATGTATTCATACGTGCGTGACGAGCTGCGCGAGACGGTCGTCAACG AATTGCCCGTCGACGGCGCGCGGCTTGGCATCTTTGGCCACTCGATGGGCGGTCATGGCGCGCTGATGCTGGCTTTGCGC AATCCGGACATCTATCGGTCCGTGTCGGCGTTCGCGCCGATTGCCGCGCCGACGCGCTGTCCGTGGGGCGAGAAAGCGTT CAGCGGTTACCTGGGCGCCGATCGCGAAGCGTGGAAGCACTACGACGCAAGCGAACTCGTCGGCAAGGCCTCACGCAAGT TTGCCGAAGGGATTCTGGTGGATCAGGGGCTCGCCGACAACTTTCTCGCGCAGCAGCTGAACCCCGACGTGTTCGAAGCC GCGTGCAAGGCAGCCGATCAGCCGCTCACGCTGCGCCGGCATGAGGGCTACGACCACGGCTACTTCTTCATTTCGACGTT CATCGAGGACCACCTCGCCCATCACGCGAAGGTGCTGCTCGGCTGA
Upstream 100 bases:
>100_bases TCACACATCACCTGAAGCTCGATCAGATCAACGAAGGCTTCGACCTGATGAAGAAGGGCGAGTCGATCCGCTCCGTCGTC ATCTACTAAAGGAGCGCGCG
Downstream 100 bases:
>100_bases AGTTGCGGGCCGCAAGTGTAGAAAGCAAAACGGGGTGGCTCCTTTAGCCACCCCGTTTCTTTTCGCGCTATCTGCGCGCA TGTTGCACCAGCAGACTCGC
Product: S-formylglutathione hydrolase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MLELIESHASFGGTQRIYSHESKAIGLPMRFSVFMPKEASQKKVPALFYLAGLTCTEETFPIKAGAQRFAAQHGIALIAP DTSPRGAGVPGETDSWDFGVGAGFYVDATQEPWSKHYRMYSYVRDELRETVVNELPVDGARLGIFGHSMGGHGALMLALR NPDIYRSVSAFAPIAAPTRCPWGEKAFSGYLGADREAWKHYDASELVGKASRKFAEGILVDQGLADNFLAQQLNPDVFEA ACKAADQPLTLRRHEGYDHGYFFISTFIEDHLAHHAKVLLG
Sequences:
>Translated_281_residues MLELIESHASFGGTQRIYSHESKAIGLPMRFSVFMPKEASQKKVPALFYLAGLTCTEETFPIKAGAQRFAAQHGIALIAP DTSPRGAGVPGETDSWDFGVGAGFYVDATQEPWSKHYRMYSYVRDELRETVVNELPVDGARLGIFGHSMGGHGALMLALR NPDIYRSVSAFAPIAAPTRCPWGEKAFSGYLGADREAWKHYDASELVGKASRKFAEGILVDQGLADNFLAQQLNPDVFEA ACKAADQPLTLRRHEGYDHGYFFISTFIEDHLAHHAKVLLG >Mature_281_residues MLELIESHASFGGTQRIYSHESKAIGLPMRFSVFMPKEASQKKVPALFYLAGLTCTEETFPIKAGAQRFAAQHGIALIAP DTSPRGAGVPGETDSWDFGVGAGFYVDATQEPWSKHYRMYSYVRDELRETVVNELPVDGARLGIFGHSMGGHGALMLALR NPDIYRSVSAFAPIAAPTRCPWGEKAFSGYLGADREAWKHYDASELVGKASRKFAEGILVDQGLADNFLAQQLNPDVFEA ACKAADQPLTLRRHEGYDHGYFFISTFIEDHLAHHAKVLLG
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=279, Percent_Identity=55.1971326164875, Blast_Score=330, Evalue=9e-91, Organism=Escherichia coli, GI1786551, Length=278, Percent_Identity=50, Blast_Score=301, Evalue=3e-83, Organism=Escherichia coli, GI1788477, Length=279, Percent_Identity=51.2544802867383, Blast_Score=288, Evalue=4e-79, Organism=Caenorhabditis elegans, GI17510185, Length=278, Percent_Identity=51.0791366906475, Blast_Score=289, Evalue=1e-78, Organism=Saccharomyces cerevisiae, GI6322393, Length=296, Percent_Identity=37.8378378378378, Blast_Score=211, Evalue=1e-55, Organism=Drosophila melanogaster, GI45551932, Length=281, Percent_Identity=52.6690391459075, Blast_Score=303, Evalue=1e-82, Organism=Drosophila melanogaster, GI24648347, Length=281, Percent_Identity=52.6690391459075, Blast_Score=302, Evalue=1e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 30882; Mature: 30882
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELIESHASFGGTQRIYSHESKAIGLPMRFSVFMPKEASQKKVPALFYLAGLTCTEETF CHHHHHHHHCCCCHHHHHHCCCCEECCCEEEEEECCCCCCCCCCCEEEEEECCEECCCCC PIKAGAQRFAAQHGIALIAPDTSPRGAGVPGETDSWDFGVGAGFYVDATQEPWSKHYRMY CCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH SYVRDELRETVVNELPVDGARLGIFGHSMGGHGALMLALRNPDIYRSVSAFAPIAAPTRC HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC PWGEKAFSGYLGADREAWKHYDASELVGKASRKFAEGILVDQGLADNFLAQQLNPDVFEA CCCHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH ACKAADQPLTLRRHEGYDHGYFFISTFIEDHLAHHAKVLLG HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLELIESHASFGGTQRIYSHESKAIGLPMRFSVFMPKEASQKKVPALFYLAGLTCTEETF CHHHHHHHHCCCCHHHHHHCCCCEECCCEEEEEECCCCCCCCCCCEEEEEECCEECCCCC PIKAGAQRFAAQHGIALIAPDTSPRGAGVPGETDSWDFGVGAGFYVDATQEPWSKHYRMY CCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHH SYVRDELRETVVNELPVDGARLGIFGHSMGGHGALMLALRNPDIYRSVSAFAPIAAPTRC HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC PWGEKAFSGYLGADREAWKHYDASELVGKASRKFAEGILVDQGLADNFLAQQLNPDVFEA CCCHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHH ACKAADQPLTLRRHEGYDHGYFFISTFIEDHLAHHAKVLLG HHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA