| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475210
Identifier: 186475210
GI number: 186475210
Start: 502157
End: 502894
Strand: Direct
Name: 186475210
Synonym: Bphy_0442
Alternate gene names: NA
Gene position: 502157-502894 (Clockwise)
Preceding gene: 186475209
Following gene: 186475211
Centisome position: 14.43
GC content: 63.14
Gene sequence:
>738_bases ATGCCGCTTTCTCCGCCAGTGTCCCGACAGTTGCGCCATCGCCGCGCAATCCAAGCGGACGCATACGAGCGTGAAGATGG CCTGTGGGATATCGAGGCATGCCTCACCGACGAAAAGCCACGTGACGTGAAGCTTGCGTCGGGTGTCCGGCCGAACGGCC TGCCGATCCATGAACTCTGGCTCCGCATCACGATCGATCGCAAGCTCAACGTCGTCGACGCTGAAGCGTCGTCGGACTGG GTTCCGTATCCCGGTCTGTGCGAAGCCTCGAATCCCGCCTATCGCGTCCTCATCGGGCTCAATCTTTTCCAGAACTTTCG TCGCGATGCTGCCCGTTTGCTGGCCGGCACGGCTGGTTGCACGCATCTCACCGAGTTGTGCGCAATCCTGCCAACTGCCG CCATTCAGGCGTTCGCTGGCGACGTCTGGAACACGGACAAAGGCAGGCCGGGAAGCGGAGAGCCCAATGGATCTGCAAAC GCTGCAGGTGAGGGCACGCAGGGCAGCAACGGACAAGACGCCAAAGACAACGCTTCGTGCGCGCAAGCAGGCGAACAGGC AAGCGAGCAATCAAACGACAAGCCGCCATTCCAGCTGGGCCGCTGCCATGCGCTGCGGTTCGATGGCGAGGCGGTGCGAC AGTTTTATCCGCGCTGGTACGGGCACGCGCCGCGTTCAGCGGATCGCGCGGATGCCGCAGCCGACGGACAGACCGTGAAG ACGGCGCGTCCCGAGTGA
Upstream 100 bases:
>100_bases TGCGGAAGCCTGCTCCAGCAAGCGCCTGCGAGCTTCGGGCAGTCTTAAAAACGCAGTATGCTAAAATTCGACGGTTCTTA AATCCGGCCTTTGGTCCCGC
Downstream 100 bases:
>100_bases GCGGTCCAGCCGGAAGCGAAGTTCAATCCAACTCTCAGACTGAAGGGAATCACGCATGAAGATTCACGAGTACCAGGGTA AGGAAATCCTGCGGAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPLSPPVSRQLRHRRAIQADAYEREDGLWDIEACLTDEKPRDVKLASGVRPNGLPIHELWLRITIDRKLNVVDAEASSDW VPYPGLCEASNPAYRVLIGLNLFQNFRRDAARLLAGTAGCTHLTELCAILPTAAIQAFAGDVWNTDKGRPGSGEPNGSAN AAGEGTQGSNGQDAKDNASCAQAGEQASEQSNDKPPFQLGRCHALRFDGEAVRQFYPRWYGHAPRSADRADAAADGQTVK TARPE
Sequences:
>Translated_245_residues MPLSPPVSRQLRHRRAIQADAYEREDGLWDIEACLTDEKPRDVKLASGVRPNGLPIHELWLRITIDRKLNVVDAEASSDW VPYPGLCEASNPAYRVLIGLNLFQNFRRDAARLLAGTAGCTHLTELCAILPTAAIQAFAGDVWNTDKGRPGSGEPNGSAN AAGEGTQGSNGQDAKDNASCAQAGEQASEQSNDKPPFQLGRCHALRFDGEAVRQFYPRWYGHAPRSADRADAAADGQTVK TARPE >Mature_244_residues PLSPPVSRQLRHRRAIQADAYEREDGLWDIEACLTDEKPRDVKLASGVRPNGLPIHELWLRITIDRKLNVVDAEASSDWV PYPGLCEASNPAYRVLIGLNLFQNFRRDAARLLAGTAGCTHLTELCAILPTAAIQAFAGDVWNTDKGRPGSGEPNGSANA AGEGTQGSNGQDAKDNASCAQAGEQASEQSNDKPPFQLGRCHALRFDGEAVRQFYPRWYGHAPRSADRADAAADGQTVKT ARPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26573; Mature: 26441
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSPPVSRQLRHRRAIQADAYEREDGLWDIEACLTDEKPRDVKLASGVRPNGLPIHELW CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCEEHHCCCCCCCCCHHHEE LRITIDRKLNVVDAEASSDWVPYPGLCEASNPAYRVLIGLNLFQNFRRDAARLLAGTAGC EEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCH THLTELCAILPTAAIQAFAGDVWNTDKGRPGSGEPNGSANAAGEGTQGSNGQDAKDNASC HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AQAGEQASEQSNDKPPFQLGRCHALRFDGEAVRQFYPRWYGHAPRSADRADAAADGQTVK HHHHHHHHHHCCCCCCHHHCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC TARPE CCCCC >Mature Secondary Structure PLSPPVSRQLRHRRAIQADAYEREDGLWDIEACLTDEKPRDVKLASGVRPNGLPIHELW CCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCEEHHCCCCCCCCCHHHEE LRITIDRKLNVVDAEASSDWVPYPGLCEASNPAYRVLIGLNLFQNFRRDAARLLAGTAGC EEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCH THLTELCAILPTAAIQAFAGDVWNTDKGRPGSGEPNGSANAAGEGTQGSNGQDAKDNASC HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH AQAGEQASEQSNDKPPFQLGRCHALRFDGEAVRQFYPRWYGHAPRSADRADAAADGQTVK HHHHHHHHHHCCCCCCHHHCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC TARPE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA