| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is recX [H]
Identifier: 186475209
GI number: 186475209
Start: 501198
End: 501986
Strand: Direct
Name: recX [H]
Synonym: Bphy_0441
Alternate gene names: 186475209
Gene position: 501198-501986 (Clockwise)
Preceding gene: 186475208
Following gene: 186475210
Centisome position: 14.41
GC content: 61.34
Gene sequence:
>789_bases GTGATACGCAAGGGCCGCTCCGCCTCCCCGAATGCGGGCGCAGGACGCAAGACGGGCGGTCCGCGTGACGACGATGCAAT TGAGTCGTCGTCACGTTCTTCGAGCATTTCGGCTTCCCCAGCATCACCCTCTTTCGGCTCGTTAACCGAAGACTTCGATC CGTTCGAGACCTTCGATGCGCATGACCGAGCCGCAGGCGTCGGCCCGTCTTCTCGCGGCCGTTCTTCAAATGACGATCGC GTCGACAACGGCGAGGCAACCTATACCCGCTCGCGTCGCGCGGACGGCGAGACCAGATCCGACGATACCGCGGATAAAAA GCGCGCTTCACAACGTCCCGCCCGTTCGCTCAAAGGTCGCGCACTCGGCTATCTTTCGCGCCGCGAGTACAGTCGTGCGG AATTGTCGCGCAAGCTCGCGCCCTATGCGGAAGAGGGCGACTCAATTGACGCATTGCTGGATTCGCTCGAAAACGAAGGC TGGCTATCGAACTCCCGGTTCGCCGAAAGTCTGCTTCACCGCCGTGCGTCGCGCATGGGGGCCGGACGTATCGTCAATGA ACTGAAGCGGCATGCCGTGGGCCAGGAACTCGTCGAAGAAGTCAGTGCGCAATTGCGCGAAACCGAACTGGCGCGCGCTC AGGCCGTATGGCGAAAGAAATTCGGCTCCTTACCCGAGACGCCCAATGAGCGCGCAAAGCAGGCCCGCTTCCTTGCGACG CGCGGCTTCTCGCAGGGAATCATCGGCAAGATTCTCAAGGGCATCGACGAAGATTTCGCGTCGGAATAG
Upstream 100 bases:
>100_bases ATCGAAAACCGTATTCGCGAATCGCTTGGCGTGAATGCGATGCCGGCGAATGCCGTCGTCGATGCGGACGAGGAAGTAGG CGAAGCGGAGTAATCGTCGC
Downstream 100 bases:
>100_bases CCTGTCGGGCACATGAGCGGGACCATTGGTGCTCCGCAAGAAAAGCTGCGCTTAAATGTCGCGCTCCAGATGCGGAAGCC TGCTCCAGCAAGCGCCTGCG
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MIRKGRSASPNAGAGRKTGGPRDDDAIESSSRSSSISASPASPSFGSLTEDFDPFETFDAHDRAAGVGPSSRGRSSNDDR VDNGEATYTRSRRADGETRSDDTADKKRASQRPARSLKGRALGYLSRREYSRAELSRKLAPYAEEGDSIDALLDSLENEG WLSNSRFAESLLHRRASRMGAGRIVNELKRHAVGQELVEEVSAQLRETELARAQAVWRKKFGSLPETPNERAKQARFLAT RGFSQGIIGKILKGIDEDFASE
Sequences:
>Translated_262_residues MIRKGRSASPNAGAGRKTGGPRDDDAIESSSRSSSISASPASPSFGSLTEDFDPFETFDAHDRAAGVGPSSRGRSSNDDR VDNGEATYTRSRRADGETRSDDTADKKRASQRPARSLKGRALGYLSRREYSRAELSRKLAPYAEEGDSIDALLDSLENEG WLSNSRFAESLLHRRASRMGAGRIVNELKRHAVGQELVEEVSAQLRETELARAQAVWRKKFGSLPETPNERAKQARFLAT RGFSQGIIGKILKGIDEDFASE >Mature_262_residues MIRKGRSASPNAGAGRKTGGPRDDDAIESSSRSSSISASPASPSFGSLTEDFDPFETFDAHDRAAGVGPSSRGRSSNDDR VDNGEATYTRSRRADGETRSDDTADKKRASQRPARSLKGRALGYLSRREYSRAELSRKLAPYAEEGDSIDALLDSLENEG WLSNSRFAESLLHRRASRMGAGRIVNELKRHAVGQELVEEVSAQLRETELARAQAVWRKKFGSLPETPNERAKQARFLAT RGFSQGIIGKILKGIDEDFASE
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 28650; Mature: 28650
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKGRSASPNAGAGRKTGGPRDDDAIESSSRSSSISASPASPSFGSLTEDFDPFETFDA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC HDRAAGVGPSSRGRSSNDDRVDNGEATYTRSRRADGETRSDDTADKKRASQRPARSLKGR HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH ALGYLSRREYSRAELSRKLAPYAEEGDSIDALLDSLENEGWLSNSRFAESLLHRRASRMG HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AGRIVNELKRHAVGQELVEEVSAQLRETELARAQAVWRKKFGSLPETPNERAKQARFLAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RGFSQGIIGKILKGIDEDFASE HCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIRKGRSASPNAGAGRKTGGPRDDDAIESSSRSSSISASPASPSFGSLTEDFDPFETFDA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC HDRAAGVGPSSRGRSSNDDRVDNGEATYTRSRRADGETRSDDTADKKRASQRPARSLKGR HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH ALGYLSRREYSRAELSRKLAPYAEEGDSIDALLDSLENEGWLSNSRFAESLLHRRASRMG HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH AGRIVNELKRHAVGQELVEEVSAQLRETELARAQAVWRKKFGSLPETPNERAKQARFLAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RGFSQGIIGKILKGIDEDFASE HCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]