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The map label for this gene is yajR [H]

Identifier: 186475109

GI number: 186475109

Start: 384242

End: 385399

Strand: Direct

Name: yajR [H]

Synonym: Bphy_0340

Alternate gene names: 186475109

Gene position: 384242-385399 (Clockwise)

Preceding gene: 186475105

Following gene: 186475110

Centisome position: 11.04

GC content: 62.35

Gene sequence:

>1158_bases
ATGAGCGCGCCTGAACTGCGCGCGACCGTGTCGCTCGCCGCAATCTTCGCGCTGCGCATGCTGGGTCTCTTCATGATCAT
GCCCGTCTTCTCGATCTACGCGAAGACGATTCCCGGCGGCGACAACGTACTGCTGGTCGGCATCGCGCTCGGCGCATACG
GCGTGACGCAATCGCTGCTGTATATCTTCTATGGCTGGATTTCCGACAAGGTCGGCCGCAAGCCCGTCATCGCGACAGGC
CTGCTGATCTTCGCGCTCGGCAGTTTCGTCGCCGCATTCGCGCACGATATGACGTGGATCATCGTCGGCCGCGTGATTCA
GGGGATGGGCGCCGTGTCGTCGGCGGTGATCGCGTTCATCGCGGATCTGACAGCGGAGGAGCACCGCACGAAGGCCATGG
CGATGGTGGGCGGTTCGATCGGCGTGTCGTTTGCCGTGGCGATCGTCGGCGCGCCGATCGTGTTTCATTGGCTCGGCATG
AGCGGACTGTTCGCGCTCGTCGGCATCTTCTCGATCCTGGCTATCGGCGTGGTGCTGTGGGTCGTGCCCGATGCGCCGAA
GCCCGTGCACGTGCCCGCGCCGTTTCACGAAGTGCTGCACAACGCGGAACTGCTGCGCCTGAACTTCGGCGTGCTGGTGC
TGCATGCCACGCAAACCGCGCTGTTTCTTGTCGTGCCGCGCATTCTGGAAGCGGGCGGTCTGCCAGTTTCGTCGCACTGG
AAAATTTACCTGCCCGTGATGGGCCTCGCCTTCGTGATGATGGTGCCCGCCATCATTGCTGCGGAGAAGCGCGGCAAGAT
GAAGGCCGTGCTGCTGAGTGCGATTGGTCTTATCCTGATCGGACAGTTACTGCTCGCCGTCGCTCCGCATACCATTGTGA
CTGTGGCCGCGATCCTGTTCGTCTATTTTCTGGGCTTCAACATTCTGGAAGCGTCGCAGCCTTCGCTGGTATCGAAGCTG
GCTCCCGGCACCCGCAAGGGCGCGGCGGCCGGCGTGTACAACACCACGCAGTCCATCGGGCTTGCAATGGGCGGCGTGAT
CGGTGGCTGGCTGCTGAAGGTAGACGGTCAGAGTGCCGTTTTCTTTGCGTGCTCAGGGCTGGTGGGATGCTGGCTTATAA
TCGCCGCCAGCATGAAACAGCCGCCGCGCAAGGCATAA

Upstream 100 bases:

>100_bases
GGTGCTGCGCGTGCGTTGTTTATGCGGGCCATCACCGGAAAGCTGCCCGTTCATTCGAAAATCGTTCCCGATGTCCAATC
CGTCCGCCACTTCTTCACGC

Downstream 100 bases:

>100_bases
GGTTTTAGGGCTCGAATTTACAGGCGGCGGGTAACGGGGCGCGCTTTCCGGTCACTCTGAGGCGGCCGTGGCGTAGACAG
CCATCCAGTGCCGCGTCGCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSLLYIFYGWISDKVGRKPVIATG
LLIFALGSFVAAFAHDMTWIIVGRVIQGMGAVSSAVIAFIADLTAEEHRTKAMAMVGGSIGVSFAVAIVGAPIVFHWLGM
SGLFALVGIFSILAIGVVLWVVPDAPKPVHVPAPFHEVLHNAELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVSSHW
KIYLPVMGLAFVMMVPAIIAAEKRGKMKAVLLSAIGLILIGQLLLAVAPHTIVTVAAILFVYFLGFNILEASQPSLVSKL
APGTRKGAAAGVYNTTQSIGLAMGGVIGGWLLKVDGQSAVFFACSGLVGCWLIIAASMKQPPRKA

Sequences:

>Translated_385_residues
MSAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSLLYIFYGWISDKVGRKPVIATG
LLIFALGSFVAAFAHDMTWIIVGRVIQGMGAVSSAVIAFIADLTAEEHRTKAMAMVGGSIGVSFAVAIVGAPIVFHWLGM
SGLFALVGIFSILAIGVVLWVVPDAPKPVHVPAPFHEVLHNAELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVSSHW
KIYLPVMGLAFVMMVPAIIAAEKRGKMKAVLLSAIGLILIGQLLLAVAPHTIVTVAAILFVYFLGFNILEASQPSLVSKL
APGTRKGAAAGVYNTTQSIGLAMGGVIGGWLLKVDGQSAVFFACSGLVGCWLIIAASMKQPPRKA
>Mature_384_residues
SAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSLLYIFYGWISDKVGRKPVIATGL
LIFALGSFVAAFAHDMTWIIVGRVIQGMGAVSSAVIAFIADLTAEEHRTKAMAMVGGSIGVSFAVAIVGAPIVFHWLGMS
GLFALVGIFSILAIGVVLWVVPDAPKPVHVPAPFHEVLHNAELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVSSHWK
IYLPVMGLAFVMMVPAIIAAEKRGKMKAVLLSAIGLILIGQLLLAVAPHTIVTVAAILFVYFLGFNILEASQPSLVSKLA
PGTRKGAAAGVYNTTQSIGLAMGGVIGGWLLKVDGQSAVFFACSGLVGCWLIIAASMKQPPRKA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=389, Percent_Identity=42.6735218508997, Blast_Score=308, Evalue=5e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40434; Mature: 40303

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHH
YIFYGWISDKVGRKPVIATGLLIFALGSFVAAFAHDMTWIIVGRVIQGMGAVSSAVIAFI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADLTAEEHRTKAMAMVGGSIGVSFAVAIVGAPIVFHWLGMSGLFALVGIFSILAIGVVLW
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVPDAPKPVHVPAPFHEVLHNAELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVSSHW
HCCCCCCCCCCCCCHHHHHCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
KIYLPVMGLAFVMMVPAIIAAEKRGKMKAVLLSAIGLILIGQLLLAVAPHTIVTVAAILF
EEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VYFLGFNILEASQPSLVSKLAPGTRKGAAAGVYNTTQSIGLAMGGVIGGWLLKVDGQSAV
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCEE
FFACSGLVGCWLIIAASMKQPPRKA
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAPELRATVSLAAIFALRMLGLFMIMPVFSIYAKTIPGGDNVLLVGIALGAYGVTQSLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHH
YIFYGWISDKVGRKPVIATGLLIFALGSFVAAFAHDMTWIIVGRVIQGMGAVSSAVIAFI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADLTAEEHRTKAMAMVGGSIGVSFAVAIVGAPIVFHWLGMSGLFALVGIFSILAIGVVLW
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVPDAPKPVHVPAPFHEVLHNAELLRLNFGVLVLHATQTALFLVVPRILEAGGLPVSSHW
HCCCCCCCCCCCCCHHHHHCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCC
KIYLPVMGLAFVMMVPAIIAAEKRGKMKAVLLSAIGLILIGQLLLAVAPHTIVTVAAILF
EEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VYFLGFNILEASQPSLVSKLAPGTRKGAAAGVYNTTQSIGLAMGGVIGGWLLKVDGQSAV
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCEE
FFACSGLVGCWLIIAASMKQPPRKA
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]