Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475104

Identifier: 186475104

GI number: 186475104

Start: 376371

End: 377219

Strand: Direct

Name: 186475104

Synonym: Bphy_0335

Alternate gene names: NA

Gene position: 376371-377219 (Clockwise)

Preceding gene: 186475103

Following gene: 186475105

Centisome position: 10.82

GC content: 65.72

Gene sequence:

>849_bases
ATGTCCTTGCCTTGCATCGTCGCCGCGCGCCGTTTCGATCGTGCGTTGCATCTGCCGTTCGTAATCGGCGATGAGCGCGT
CGGCTGGATTCGCGCGAACGGTGTGCCGTTGCTCGCACGCTGGCCCGATGTGTTCGATATCGACGCGCAGCGCGTTGTAT
TGGCGCCGCAATTCGACACGGTGGATCTGCGCAGCGCGGCGCTCGGCTCGGTGATCGGCGCGCTCGCAGCCGAAGGCCGC
ATCCCTGGCTGGCGCGATGAAACCTACGCCATCCGCAATGCGTTCGATGCGCCGCCGCTCGCGTATATCGAGCGCGCGGC
GTCGCGCTTTTTCGGCACGATGACGTATGCGGTGCATCTGAACGGCGTCGTAGAATACGTGGGTCGCGCGCCGCAACTGT
GGATCGCGCGCCGCAGCGAGACGAAGGCCACCGACCCCGGCATGCTCGACAACGTCGTGGCGGGCGGCATCGGCTGGGGT
TTCAGTCTGGCTGGGACGATCGTCAAGGAGTGCTGGGAAGAGGCGGGTATTCCGGAAGAGATCGCGGCGCGCGCGGTCGC
GGGGCGCACGGCGCACGTGCTGCAGTCCTTGCCGGAAGGCACGCAGGCCGAGCAGATTTTCATCTACGACCTCGCGTTAC
CCGAAGACTTCGCGCCACGCAATCAGGACGGTGAAGTCGGCGAGCATCGGCTGGCTCGTATCGAAGACGTCGCGCAGGCA
ATCGAAGAAGGTGCGATGACCGTCGATGCCAGTCTCGCCACGCTCGATTGCCTGCTGCGCCGCCGCTGGATCGACGAGGA
CGCATGCGCGGGCATCGACGCGCTGTTCGAGCCGCCCGTTCTCGATTGA

Upstream 100 bases:

>100_bases
TGCGACCTTCATCGCAATCGGCATTCGCGTCGCGTTGCGCGACTGAGTCGGGTCGGTACTCTTGCTCGCGCTTTATTCAT
CACGCAGTCCGGAGTCTTCA

Downstream 100 bases:

>100_bases
TCTGAGGCACCGTCGCAGACGTGCCGCAATACCTATCAAGCAACACGCACTGAAGAAGGGAGTCACCGAGGTCATGTCGA
CCGAACACAGCTTTATTCTC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: Thiamin Pyrophosphokinase; NUDIX Domain-Containing Protein; Nucleoside Diphosphate; Thiamine Pyrophosphokinase; Nucleoside Diphosphate Hydrolase Protein; NTP Pyrophosphohydrolase; MutT/Nudix Family Protein; NUDIX Domain Family Protein; Nudix Family Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Nudix Hydrolase; NUDIX Domain-Containing; Hydrolase NUDIX Family

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSLPCIVAARRFDRALHLPFVIGDERVGWIRANGVPLLARWPDVFDIDAQRVVLAPQFDTVDLRSAALGSVIGALAAEGR
IPGWRDETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHLNGVVEYVGRAPQLWIARRSETKATDPGMLDNVVAGGIGWG
FSLAGTIVKECWEEAGIPEEIAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPEDFAPRNQDGEVGEHRLARIEDVAQA
IEEGAMTVDASLATLDCLLRRRWIDEDACAGIDALFEPPVLD

Sequences:

>Translated_282_residues
MSLPCIVAARRFDRALHLPFVIGDERVGWIRANGVPLLARWPDVFDIDAQRVVLAPQFDTVDLRSAALGSVIGALAAEGR
IPGWRDETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHLNGVVEYVGRAPQLWIARRSETKATDPGMLDNVVAGGIGWG
FSLAGTIVKECWEEAGIPEEIAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPEDFAPRNQDGEVGEHRLARIEDVAQA
IEEGAMTVDASLATLDCLLRRRWIDEDACAGIDALFEPPVLD
>Mature_281_residues
SLPCIVAARRFDRALHLPFVIGDERVGWIRANGVPLLARWPDVFDIDAQRVVLAPQFDTVDLRSAALGSVIGALAAEGRI
PGWRDETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHLNGVVEYVGRAPQLWIARRSETKATDPGMLDNVVAGGIGWGF
SLAGTIVKECWEEAGIPEEIAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPEDFAPRNQDGEVGEHRLARIEDVAQAI
EEGAMTVDASLATLDCLLRRRWIDEDACAGIDALFEPPVLD

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322602, Length=240, Percent_Identity=27.9166666666667, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30791; Mature: 30660

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPCIVAARRFDRALHLPFVIGDERVGWIRANGVPLLARWPDVFDIDAQRVVLAPQFDT
CCCCHHHHHHHHHHHEECCEEECCCCEEEEEECCEEEEECCCCEEECCCCEEEECCCCCC
VDLRSAALGSVIGALAAEGRIPGWRDETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHL
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEH
NGVVEYVGRAPQLWIARRSETKATDPGMLDNVVAGGIGWGFSLAGTIVKECWEEAGIPEE
HHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
IAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPEDFAPRNQDGEVGEHRLARIEDVAQA
HHHHHHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
IEEGAMTVDASLATLDCLLRRRWIDEDACAGIDALFEPPVLD
HHHCCEEECHHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCC
>Mature Secondary Structure 
SLPCIVAARRFDRALHLPFVIGDERVGWIRANGVPLLARWPDVFDIDAQRVVLAPQFDT
CCCHHHHHHHHHHHEECCEEECCCCEEEEEECCEEEEECCCCEEECCCCEEEECCCCCC
VDLRSAALGSVIGALAAEGRIPGWRDETYAIRNAFDAPPLAYIERAASRFFGTMTYAVHL
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEH
NGVVEYVGRAPQLWIARRSETKATDPGMLDNVVAGGIGWGFSLAGTIVKECWEEAGIPEE
HHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
IAARAVAGRTAHVLQSLPEGTQAEQIFIYDLALPEDFAPRNQDGEVGEHRLARIEDVAQA
HHHHHHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH
IEEGAMTVDASLATLDCLLRRRWIDEDACAGIDALFEPPVLD
HHHCCEEECHHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA