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The map label for this gene is 186475056

Identifier: 186475056

GI number: 186475056

Start: 327228

End: 327845

Strand: Direct

Name: 186475056

Synonym: Bphy_0287

Alternate gene names: NA

Gene position: 327228-327845 (Clockwise)

Preceding gene: 186475055

Following gene: 186475058

Centisome position: 9.41

GC content: 63.92

Gene sequence:

>618_bases
ATGCTCACTGAACGGTTCGCGCGCGCGGCGCGCGTTGCTTTCGTCGCGTGCGCGCTCGGCGGCGCGGCGCTGGTCTCTGG
ATGCGGGAAAGAACAGCCCGCGTTCACGAACGTCGATATCACGGGAAACAAGCAGTTCGGCACGGACTTCTCGCTGCCCG
ACTCGAGCGGCAAGACGCGCACGCTCGCGGACTATAAGGGCAAGGTCGTCGTGCTGTTCTTCGGCTACACGCATTGTCCC
GACGTGTGCCCGACGACGATGGCGGAACTCTCGCAGGCACTCCAGCAACTTGGTCCCGAAGACGCGAAGCGCGTGCAGGT
GCTATTCGTCACAGTCGATCCCGAGCGCGACACCCCCGAACTGATGGCGCAATACGTGCCGGCTTTCAATCCGACCTTCG
TCGGCCTGCGTCCTGCCGACCAGGCGCAGCTGACCAAGGTGACGAAAGATTTCCGCGTGTACTACGCGAAGGTGCCGGGC
AAGTCGCCTGACAGCTACACGATGGACCACACGGCCGCCAGCTACGTGTTCGACACCGACGGCAAGCTGCGCCTGTTCGC
GCGCGATGGCCAAGGCGCGTCGCCTTGGGTGCACGATCTCAAGCTGTTACTCGGCTGA

Upstream 100 bases:

>100_bases
GCGCGTAAAACCTTCCGTTATTCGATCGTTTATCTGTCGCTGCTGTTTGCGGCGCTGTTGATCGACCACTATGCGCGTGC
CTTGATCGGCGCGTAACACC

Downstream 100 bases:

>100_bases
TCGAACGGCACGAAAGCCGAACGCTGAAACGAAAAGGCTGCACGCGCGTGCAGCCTTTTTCTTTTGGACGCCCCACCTCA
TTCGGGCACTTTGAGGTTCA

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MLTERFARAARVAFVACALGGAALVSGCGKEQPAFTNVDITGNKQFGTDFSLPDSSGKTRTLADYKGKVVVLFFGYTHCP
DVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPELMAQYVPAFNPTFVGLRPADQAQLTKVTKDFRVYYAKVPG
KSPDSYTMDHTAASYVFDTDGKLRLFARDGQGASPWVHDLKLLLG

Sequences:

>Translated_205_residues
MLTERFARAARVAFVACALGGAALVSGCGKEQPAFTNVDITGNKQFGTDFSLPDSSGKTRTLADYKGKVVVLFFGYTHCP
DVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPELMAQYVPAFNPTFVGLRPADQAQLTKVTKDFRVYYAKVPG
KSPDSYTMDHTAASYVFDTDGKLRLFARDGQGASPWVHDLKLLLG
>Mature_205_residues
MLTERFARAARVAFVACALGGAALVSGCGKEQPAFTNVDITGNKQFGTDFSLPDSSGKTRTLADYKGKVVVLFFGYTHCP
DVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPELMAQYVPAFNPTFVGLRPADQAQLTKVTKDFRVYYAKVPG
KSPDSYTMDHTAASYVFDTDGKLRLFARDGQGASPWVHDLKLLLG

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=134, Percent_Identity=41.7910447761194, Blast_Score=117, Evalue=6e-27,
Organism=Homo sapiens, GI281182722, Length=134, Percent_Identity=41.7910447761194, Blast_Score=117, Evalue=6e-27,
Organism=Homo sapiens, GI281182716, Length=134, Percent_Identity=41.7910447761194, Blast_Score=117, Evalue=6e-27,
Organism=Homo sapiens, GI153791313, Length=134, Percent_Identity=41.7910447761194, Blast_Score=117, Evalue=6e-27,
Organism=Homo sapiens, GI4759068, Length=143, Percent_Identity=35.6643356643357, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17531419, Length=145, Percent_Identity=30.3448275862069, Blast_Score=93, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6319498, Length=143, Percent_Identity=34.2657342657343, Blast_Score=105, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6319511, Length=143, Percent_Identity=31.4685314685315, Blast_Score=92, Evalue=6e-20,
Organism=Drosophila melanogaster, GI19920710, Length=143, Percent_Identity=37.0629370629371, Blast_Score=113, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 22337; Mature: 22337

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTERFARAARVAFVACALGGAALVSGCGKEQPAFTNVDITGNKQFGTDFSLPDSSGKTR
CCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
TLADYKGKVVVLFFGYTHCPDVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPE
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHH
LMAQYVPAFNPTFVGLRPADQAQLTKVTKDFRVYYAKVPGKSPDSYTMDHTAASYVFDTD
HHHHHCCCCCCEEEECCCCCHHHHHHHHHCEEEEEEECCCCCCCCEEECCCCEEEEEECC
GKLRLFARDGQGASPWVHDLKLLLG
CCEEEEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLTERFARAARVAFVACALGGAALVSGCGKEQPAFTNVDITGNKQFGTDFSLPDSSGKTR
CCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
TLADYKGKVVVLFFGYTHCPDVCPTTMAELSQALQQLGPEDAKRVQVLFVTVDPERDTPE
EEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHH
LMAQYVPAFNPTFVGLRPADQAQLTKVTKDFRVYYAKVPGKSPDSYTMDHTAASYVFDTD
HHHHHCCCCCCEEEECCCCCHHHHHHHHHCEEEEEEECCCCCCCCEEECCCCEEEEEECC
GKLRLFARDGQGASPWVHDLKLLLG
CCEEEEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA