| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is phbI [H]
Identifier: 186475031
GI number: 186475031
Start: 305778
End: 307520
Strand: Direct
Name: phbI [H]
Synonym: Bphy_0262
Alternate gene names: 186475031
Gene position: 305778-307520 (Clockwise)
Preceding gene: 186475030
Following gene: 186475034
Centisome position: 8.79
GC content: 64.43
Gene sequence:
>1743_bases GTGTCCTTCACGCTGCATGGAATTCCCGTGTCACGCGGTATCGCCATCGGGCGGGCATATCTGATCGCCCCGGCTGCACT GGACGTCGACCACTATCTGATCGAGCCCTCGCAGATCGAGGGCGAGGTGGAGCGTTTTCGTGCGGCGCAGGCAGTCGTGC ATCGGGAACTCGCCGAACTCCGCGCCGATCTCGCCGCGGACGCGCCCTCTGAAATGGGCGCCTTCATCGACGTGCATGCC ATGATCCTGAACGACGCGATGCTCGTTCAGGAAACCATCGACCTCATCCGTACGCGCCGCTACAACGTGGAGTGGGCGCT GACCGAGCAGCTCGAACGTCTCACGCGCCACTTCGACGAAGTAGAAGACGAGTATCTGCGCGAGCGCAAGGCCGACATCG AACAGGTGGTCGAGCGCGTGCTGAAGGCGCTCGCGGGCGCGACGGGTGCGCTCGTCAATGGCATTCATGGGCGCTGCGAC GAAATGATCGTCGTCGCGCACGACATCGCGCCCGCCGACATGATGCAGTTCAAGACGCAGACGTTCCAGGGCTTCGTGAC GGATCTGGGCGGCCGTACCTCGCATACGGCGATCGTCGCGCGCAGTCTCGGCATTCCCGCGGCGGTCGGCGTGCAGCACG CAAGCGCACTGATCCGGCAGGATGATCTGATCATTGTCGACGGCGATCACGGCATCGTGATCGTCGATCCCGCGCCGATC GTGCTCGAAGAGTACTCCTACCGGCAGAGCGAAAAGGCGCTGGAAGCGCGCAAGCTGCAGCGCCTGAAGTTCTCGCCGAC ACAGACGGTGTGCGGCACGCGTATCGAGCTGTGCGCGAACATCGAATTGCCCGACGACGCGCAGGCCGCGCTCGACGCGG GCGCGACAGGGATCGGCCTGTTCCGCACCGAGTTTCTGTTCATGAACACGAAGGACCGGATGCCGGAGGAGGAAGAGCAG TTCGCCGCATACCGCCGCGCCGTCGAGTTGATGAACGGCATGCCCGTGACGATCCGCACGATCGACGTCGGCGCGGATAA GCCGCTCGAGTCGATCGGCGACGAGTTCGAGACGGCGCCCAACCCGGCGCTCGGTCTGCGCGCGATCCGTTGGAGCCTGT CCGAGCCGCACATGTTTCTCACGCAACTGCGCGCGATTCTCCGCGCATCGGCGTTCGGTTCGGTGAAGATCCTGATTCCG ATGCTTGCGCACGCGCGCGAGATCGATCAGACGCTCGACCTCATTCAGGAAGCCAAGCGCCAGCTCGATGACGCGGGCCT CGCGTACGATCCGAACGTGCGCGTCGGCGCGATGATCGAGATTCCGGCGGCGGCGATCGCGTTGCCGCTGTTCCTGAAGC GGCTCGATTTCCTCTCGATCGGCACCAATGACCTGATCCAGTACACGCTCGCGATCGATCGCGCGGACAACGCAGTGGCG CATCTGTACGACCCGCTGCATCCCGCCGTTCTGCATTTGATCGCGTTTACGCTTCGCGAGGCGAAGCGTGCGGGTGTGCC GGTGTCGATCTGCGGAGAAATGGCGGGCGATCCGTCGCTCACGCGCCTGCTGCTCGGCATGGGACTGACGGAGTTCTCGA TGCATCCGAGCCAGTTGCTGCTCGTGAAGCAGGAGGTGCTGCGCGCTCAGCTGAAGGCGCTGGAAAAGCCGGTTGCCGAC GTGCTGGCCGCGTTCGAACCGGAAGAGGTGCAGTCAGCGCTGGAGCGGGTCGCACAGGCCTGA
Upstream 100 bases:
>100_bases CTGCACAGCACGGTTAACGGGACGGAATTTATAATGACCGTCGGGGTCTGAGAGCACTGCAGCGGTTTGCCGCGGCATCA CACAACTAGAGGAGGTGCGC
Downstream 100 bases:
>100_bases CGTTCATGCCGACAGGCGCGCGGGGCGCGGTCGGCAGGCAATTTACTTTACGAACGATGCCGCTCGCCGCACACCGGGCA ATCCGGCTGGCGCGCGATGC
Product: phosphoenolpyruvate-protein phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase system, enzyme I; Protein I [H]
Number of amino acids: Translated: 580; Mature: 579
Protein sequence:
>580_residues MSFTLHGIPVSRGIAIGRAYLIAPAALDVDHYLIEPSQIEGEVERFRAAQAVVHRELAELRADLAADAPSEMGAFIDVHA MILNDAMLVQETIDLIRTRRYNVEWALTEQLERLTRHFDEVEDEYLRERKADIEQVVERVLKALAGATGALVNGIHGRCD EMIVVAHDIAPADMMQFKTQTFQGFVTDLGGRTSHTAIVARSLGIPAAVGVQHASALIRQDDLIIVDGDHGIVIVDPAPI VLEEYSYRQSEKALEARKLQRLKFSPTQTVCGTRIELCANIELPDDAQAALDAGATGIGLFRTEFLFMNTKDRMPEEEEQ FAAYRRAVELMNGMPVTIRTIDVGADKPLESIGDEFETAPNPALGLRAIRWSLSEPHMFLTQLRAILRASAFGSVKILIP MLAHAREIDQTLDLIQEAKRQLDDAGLAYDPNVRVGAMIEIPAAAIALPLFLKRLDFLSIGTNDLIQYTLAIDRADNAVA HLYDPLHPAVLHLIAFTLREAKRAGVPVSICGEMAGDPSLTRLLLGMGLTEFSMHPSQLLLVKQEVLRAQLKALEKPVAD VLAAFEPEEVQSALERVAQA
Sequences:
>Translated_580_residues MSFTLHGIPVSRGIAIGRAYLIAPAALDVDHYLIEPSQIEGEVERFRAAQAVVHRELAELRADLAADAPSEMGAFIDVHA MILNDAMLVQETIDLIRTRRYNVEWALTEQLERLTRHFDEVEDEYLRERKADIEQVVERVLKALAGATGALVNGIHGRCD EMIVVAHDIAPADMMQFKTQTFQGFVTDLGGRTSHTAIVARSLGIPAAVGVQHASALIRQDDLIIVDGDHGIVIVDPAPI VLEEYSYRQSEKALEARKLQRLKFSPTQTVCGTRIELCANIELPDDAQAALDAGATGIGLFRTEFLFMNTKDRMPEEEEQ FAAYRRAVELMNGMPVTIRTIDVGADKPLESIGDEFETAPNPALGLRAIRWSLSEPHMFLTQLRAILRASAFGSVKILIP MLAHAREIDQTLDLIQEAKRQLDDAGLAYDPNVRVGAMIEIPAAAIALPLFLKRLDFLSIGTNDLIQYTLAIDRADNAVA HLYDPLHPAVLHLIAFTLREAKRAGVPVSICGEMAGDPSLTRLLLGMGLTEFSMHPSQLLLVKQEVLRAQLKALEKPVAD VLAAFEPEEVQSALERVAQA >Mature_579_residues SFTLHGIPVSRGIAIGRAYLIAPAALDVDHYLIEPSQIEGEVERFRAAQAVVHRELAELRADLAADAPSEMGAFIDVHAM ILNDAMLVQETIDLIRTRRYNVEWALTEQLERLTRHFDEVEDEYLRERKADIEQVVERVLKALAGATGALVNGIHGRCDE MIVVAHDIAPADMMQFKTQTFQGFVTDLGGRTSHTAIVARSLGIPAAVGVQHASALIRQDDLIIVDGDHGIVIVDPAPIV LEEYSYRQSEKALEARKLQRLKFSPTQTVCGTRIELCANIELPDDAQAALDAGATGIGLFRTEFLFMNTKDRMPEEEEQF AAYRRAVELMNGMPVTIRTIDVGADKPLESIGDEFETAPNPALGLRAIRWSLSEPHMFLTQLRAILRASAFGSVKILIPM LAHAREIDQTLDLIQEAKRQLDDAGLAYDPNVRVGAMIEIPAAAIALPLFLKRLDFLSIGTNDLIQYTLAIDRADNAVAH LYDPLHPAVLHLIAFTLREAKRAGVPVSICGEMAGDPSLTRLLLGMGLTEFSMHPSQLLLVKQEVLRAQLKALEKPVADV LAAFEPEEVQSALERVAQA
Specific function: General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their tr
COG id: COG1080
COG function: function code G; Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1788756, Length=566, Percent_Identity=38.86925795053, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI1789193, Length=537, Percent_Identity=35.3817504655494, Blast_Score=305, Evalue=6e-84, Organism=Escherichia coli, GI48994992, Length=475, Percent_Identity=33.8947368421053, Blast_Score=252, Evalue=4e-68, Organism=Escherichia coli, GI1788726, Length=577, Percent_Identity=28.42287694974, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI1787994, Length=397, Percent_Identity=27.2040302267003, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI226510935, Length=167, Percent_Identity=26.3473053892216, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2659 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 63849; Mature: 63718
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTLHGIPVSRGIAIGRAYLIAPAALDVDHYLIEPSQIEGEVERFRAAQAVVHRELAEL CCEEEECCCHHCCHHHHHHHEEECHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHH RADLAADAPSEMGAFIDVHAMILNDAMLVQETIDLIRTRRYNVEWALTEQLERLTRHFDE HHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VEDEYLRERKADIEQVVERVLKALAGATGALVNGIHGRCDEMIVVAHDIAPADMMQFKTQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHH TFQGFVTDLGGRTSHTAIVARSLGIPAAVGVQHASALIRQDDLIIVDGDHGIVIVDPAPI HHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCH VLEEYSYRQSEKALEARKLQRLKFSPTQTVCGTRIELCANIELPDDAQAALDAGATGIGL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCCHHHHHHCCCCCHHH FRTEFLFMNTKDRMPEEEEQFAAYRRAVELMNGMPVTIRTIDVGADKPLESIGDEFETAP HHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCHHHHCCC NPALGLRAIRWSLSEPHMFLTQLRAILRASAFGSVKILIPMLAHAREIDQTLDLIQEAKR CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QLDDAGLAYDPNVRVGAMIEIPAAAIALPLFLKRLDFLSIGTNDLIQYTLAIDRADNAVA HHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHEEEHHEEECCCCHHH HLYDPLHPAVLHLIAFTLREAKRAGVPVSICGEMAGDPSLTRLLLGMGLTEFSMHPSQLL HHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHH LVKQEVLRAQLKALEKPVADVLAAFEPEEVQSALERVAQA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure SFTLHGIPVSRGIAIGRAYLIAPAALDVDHYLIEPSQIEGEVERFRAAQAVVHRELAEL CEEEECCCHHCCHHHHHHHEEECHHCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHH RADLAADAPSEMGAFIDVHAMILNDAMLVQETIDLIRTRRYNVEWALTEQLERLTRHFDE HHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VEDEYLRERKADIEQVVERVLKALAGATGALVNGIHGRCDEMIVVAHDIAPADMMQFKTQ HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHH TFQGFVTDLGGRTSHTAIVARSLGIPAAVGVQHASALIRQDDLIIVDGDHGIVIVDPAPI HHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCH VLEEYSYRQSEKALEARKLQRLKFSPTQTVCGTRIELCANIELPDDAQAALDAGATGIGL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCCHHHHHHCCCCCHHH FRTEFLFMNTKDRMPEEEEQFAAYRRAVELMNGMPVTIRTIDVGADKPLESIGDEFETAP HHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCHHHHCCC NPALGLRAIRWSLSEPHMFLTQLRAILRASAFGSVKILIPMLAHAREIDQTLDLIQEAKR CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QLDDAGLAYDPNVRVGAMIEIPAAAIALPLFLKRLDFLSIGTNDLIQYTLAIDRADNAVA HHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHEEEHHEEECCCCHHH HLYDPLHPAVLHLIAFTLREAKRAGVPVSICGEMAGDPSLTRLLLGMGLTEFSMHPSQLL HHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHCCCHHHCCCHHHHH LVKQEVLRAQLKALEKPVADVLAAFEPEEVQSALERVAQA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1653223 [H]