| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475019
Identifier: 186475019
GI number: 186475019
Start: 295405
End: 296730
Strand: Direct
Name: 186475019
Synonym: Bphy_0250
Alternate gene names: NA
Gene position: 295405-296730 (Clockwise)
Preceding gene: 186475018
Following gene: 186475020
Centisome position: 8.49
GC content: 45.78
Gene sequence:
>1326_bases ATGACACCGCAAGATTTATATTCTTTTCTTTCTGACGTTCGACTGGTTGATTTGATTGAGCGAGTAAAGATTTCGGATGA CTTTCTTGATGTCGTATCGCTCACGGAAACTCAACATTCTGATATGTTGGCTTGGTGTTTGCACCCTAACGAAGGTCACG GGCAAGGGGATGCGGTCGTTAAAGATTTTTTAATTGCCGCTTATACTGCGGGAGTGGAAAGTAACAAATATTCAAATAAG AATTTTTATCGAAAGTGGACGCCGGGGCGAATTCGTACCGCAAGTTTTGGCTCCGCGTTTATTGCGCGTGAATTTAGTCT AAATTCAGGGCTGGAAAAAAAGCGTGGGCGACTCGACCTTTTCTTGATTGATCCGAGTAACAAACTCGTTGTAACGATAG AAAATAAAGCGGGAGCTTCTCTCACTGAGGCACAGTTAAGCGCCTATTATTCCGCAGTTAGCGAACAAATTGCCAGTCGC CCTGTTTTTCAAGAATATGATTTTGCCTACGTTGTTGTGGATCGGGACCTTTCCGAGTATCCCGACGAACATTTGGATGC TTTAGGTAGTAGGTGGACATTACTTGATTATAGTTGGCTAGAGGCATCTGCAAATCGGGCGCGACGCCACATGGAGCGCA ATAATGAAGCAGCCCAGTTACTCATGGCTTATTGTCAGAGGCAAACTGGATGGCAGAGTCCCAACGAAAAGATCGTTTCA GAATTATCGGCCGAGCTGGCTGCACAGCATGAACTCGTTGTAGAGGCGATTAAGTCCGTCAGGAAACTTCGACCTACGGA TTGGACGCCGACTAATTTCAGTGGGGACGCTGGCGAACTCTTGCTTTTCGTTCAACAAAATCCGCAATTGTGTGAGCATC TAGTTCAGGCCCGAGGAATTGGATCAGTACTCGTTGGACTACGCACGGCGCTACCTACTTTAACTCATGAGGACATTGAG CACGGTCGGACATGGCTTCGATTTTCCACACGTAACATGCAAGCTCTCATGCGAAGCACTGACGGGTTCTGGCCAATTTT CGTCAACGTATATCGTGAAACAAGTGATTTAGAAAGTTCAAAGTTCACAATCAGGCTTATTTGGGCTACCGAACATTTCA CAGAAACCGAATGTGATGTCGATGCGCTTAGAGACCATATGTCGAAGCGTTTTCCCGAGCTCAAGAAATTTGGAAGCAGC GCATACCGCAGGCTGGTAATCGAGCGAAAACTAAATGCAACATCCGTTATTCGAAAAGTAACCGAAGTAGTGCGTGATGT GGAATCTCAACTCAATTCTGCTAGACGGGCTGGCATTTTTAATTGA
Upstream 100 bases:
>100_bases TTTCCCACCCAAAAAACTGTTCGAACAGAAGGAAAGAGTCGAACCGGGGAAGCCGTCGGCGGGTAGCCTAAACATAAACA AATAAATTCGCGCTATTTTT
Downstream 100 bases:
>100_bases ACAGACGTTCGGAGCGACGGAATCTTTGTAGGCCGCACGGCGTCAAAAATGAAGGATCACTCTGATTCTGAACGAGAGTC ACCTAAATCTCATCTACTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTPQDLYSFLSDVRLVDLIERVKISDDFLDVVSLTETQHSDMLAWCLHPNEGHGQGDAVVKDFLIAAYTAGVESNKYSNK NFYRKWTPGRIRTASFGSAFIAREFSLNSGLEKKRGRLDLFLIDPSNKLVVTIENKAGASLTEAQLSAYYSAVSEQIASR PVFQEYDFAYVVVDRDLSEYPDEHLDALGSRWTLLDYSWLEASANRARRHMERNNEAAQLLMAYCQRQTGWQSPNEKIVS ELSAELAAQHELVVEAIKSVRKLRPTDWTPTNFSGDAGELLLFVQQNPQLCEHLVQARGIGSVLVGLRTALPTLTHEDIE HGRTWLRFSTRNMQALMRSTDGFWPIFVNVYRETSDLESSKFTIRLIWATEHFTETECDVDALRDHMSKRFPELKKFGSS AYRRLVIERKLNATSVIRKVTEVVRDVESQLNSARRAGIFN
Sequences:
>Translated_441_residues MTPQDLYSFLSDVRLVDLIERVKISDDFLDVVSLTETQHSDMLAWCLHPNEGHGQGDAVVKDFLIAAYTAGVESNKYSNK NFYRKWTPGRIRTASFGSAFIAREFSLNSGLEKKRGRLDLFLIDPSNKLVVTIENKAGASLTEAQLSAYYSAVSEQIASR PVFQEYDFAYVVVDRDLSEYPDEHLDALGSRWTLLDYSWLEASANRARRHMERNNEAAQLLMAYCQRQTGWQSPNEKIVS ELSAELAAQHELVVEAIKSVRKLRPTDWTPTNFSGDAGELLLFVQQNPQLCEHLVQARGIGSVLVGLRTALPTLTHEDIE HGRTWLRFSTRNMQALMRSTDGFWPIFVNVYRETSDLESSKFTIRLIWATEHFTETECDVDALRDHMSKRFPELKKFGSS AYRRLVIERKLNATSVIRKVTEVVRDVESQLNSARRAGIFN >Mature_440_residues TPQDLYSFLSDVRLVDLIERVKISDDFLDVVSLTETQHSDMLAWCLHPNEGHGQGDAVVKDFLIAAYTAGVESNKYSNKN FYRKWTPGRIRTASFGSAFIAREFSLNSGLEKKRGRLDLFLIDPSNKLVVTIENKAGASLTEAQLSAYYSAVSEQIASRP VFQEYDFAYVVVDRDLSEYPDEHLDALGSRWTLLDYSWLEASANRARRHMERNNEAAQLLMAYCQRQTGWQSPNEKIVSE LSAELAAQHELVVEAIKSVRKLRPTDWTPTNFSGDAGELLLFVQQNPQLCEHLVQARGIGSVLVGLRTALPTLTHEDIEH GRTWLRFSTRNMQALMRSTDGFWPIFVNVYRETSDLESSKFTIRLIWATEHFTETECDVDALRDHMSKRFPELKKFGSSA YRRLVIERKLNATSVIRKVTEVVRDVESQLNSARRAGIFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50285; Mature: 50154
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQDLYSFLSDVRLVDLIERVKISDDFLDVVSLTETQHSDMLAWCLHPNEGHGQGDAVV CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHH KDFLIAAYTAGVESNKYSNKNFYRKWTPGRIRTASFGSAFIAREFSLNSGLEKKRGRLDL HHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCCCHHHHHHHCCCCCCHHHCCCEEE FLIDPSNKLVVTIENKAGASLTEAQLSAYYSAVSEQIASRPVFQEYDFAYVVVDRDLSEY EEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHC PDEHLDALGSRWTLLDYSWLEASANRARRHMERNNEAAQLLMAYCQRQTGWQSPNEKIVS CHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHH ELSAELAAQHELVVEAIKSVRKLRPTDWTPTNFSGDAGELLLFVQQNPQLCEHLVQARGI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCH GSVLVGLRTALPTLTHEDIEHGRTWLRFSTRNMQALMRSTDGFWPIFVNVYRETSDLESS HHHHHHHHHHHCHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCEEHHEEHHHHCCCCCC KFTIRLIWATEHFTETECDVDALRDHMSKRFPELKKFGSSAYRRLVIERKLNATSVIRKV CEEEEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH TEVVRDVESQLNSARRAGIFN HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPQDLYSFLSDVRLVDLIERVKISDDFLDVVSLTETQHSDMLAWCLHPNEGHGQGDAVV CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHH KDFLIAAYTAGVESNKYSNKNFYRKWTPGRIRTASFGSAFIAREFSLNSGLEKKRGRLDL HHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEECCCCCHHHHHHHCCCCCCHHHCCCEEE FLIDPSNKLVVTIENKAGASLTEAQLSAYYSAVSEQIASRPVFQEYDFAYVVVDRDLSEY EEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHC PDEHLDALGSRWTLLDYSWLEASANRARRHMERNNEAAQLLMAYCQRQTGWQSPNEKIVS CHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHH ELSAELAAQHELVVEAIKSVRKLRPTDWTPTNFSGDAGELLLFVQQNPQLCEHLVQARGI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCH GSVLVGLRTALPTLTHEDIEHGRTWLRFSTRNMQALMRSTDGFWPIFVNVYRETSDLESS HHHHHHHHHHHCHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCEEHHEEHHHHCCCCCC KFTIRLIWATEHFTETECDVDALRDHMSKRFPELKKFGSSAYRRLVIERKLNATSVIRKV CEEEEEEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH TEVVRDVESQLNSARRAGIFN HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA