| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475018
Identifier: 186475018
GI number: 186475018
Start: 294863
End: 295270
Strand: Direct
Name: 186475018
Synonym: Bphy_0249
Alternate gene names: NA
Gene position: 294863-295270 (Clockwise)
Preceding gene: 186475015
Following gene: 186475019
Centisome position: 8.48
GC content: 55.39
Gene sequence:
>408_bases ATGACTGAAATGAAAACGGTGACGACCTACGGCGCGATTCTCGGGGCTGTGCTGGGGCAGATCAGATCGGCCGCCGGAAT GAAGCAAAGCGACCTTGCAGAGGCCGTAGGTGTCGGTCCATCGACATGGTCTCGTATTGAAAAGGGTGAAAGTTCGTTGT CGACAGATCAACTGAAGTTGGCTGCCGACGCGCTGAAGGTGCCGCCTTCGCGGATCCTCGAGATGGTGGATGTGGCAGAA AAAATAACTGCTGATAAAGGCATTGCTCGTGAGCCGGTCGGCCAAGCCCAATGGACTGTAGCTGCTGGCGCCGTCGCGCT TGGTCTCATACCGGTAGTGGGAAGCATGTTGAGCAATATCGTCGCGGGCGCAATCAAATCTCAGATCGAGAAGGCGATCA AGAAGTAG
Upstream 100 bases:
>100_bases GATGCAAGTAGCCATGGAGTGCAATGATGCATGTTGTAAAATATGGCGACCGAGGAGCAGTTGCCGTATCATGCGAATGT GAGCTTGGACGGGAGCAGCT
Downstream 100 bases:
>100_bases TCGGTCACCCCTTCCCAAACTGAACGACGAGGCGTTTCCCACCCAAAAAACTGTTCGAACAGAAGGAAAGAGTCGAACCG GGGAAGCCGTCGGCGGGTAG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTEMKTVTTYGAILGAVLGQIRSAAGMKQSDLAEAVGVGPSTWSRIEKGESSLSTDQLKLAADALKVPPSRILEMVDVAE KITADKGIAREPVGQAQWTVAAGAVALGLIPVVGSMLSNIVAGAIKSQIEKAIKK
Sequences:
>Translated_135_residues MTEMKTVTTYGAILGAVLGQIRSAAGMKQSDLAEAVGVGPSTWSRIEKGESSLSTDQLKLAADALKVPPSRILEMVDVAE KITADKGIAREPVGQAQWTVAAGAVALGLIPVVGSMLSNIVAGAIKSQIEKAIKK >Mature_134_residues TEMKTVTTYGAILGAVLGQIRSAAGMKQSDLAEAVGVGPSTWSRIEKGESSLSTDQLKLAADALKVPPSRILEMVDVAEK ITADKGIAREPVGQAQWTVAAGAVALGLIPVVGSMLSNIVAGAIKSQIEKAIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13929; Mature: 13798
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMKTVTTYGAILGAVLGQIRSAAGMKQSDLAEAVGVGPSTWSRIEKGESSLSTDQLKL CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCHHCCHHHHHH AADALKVPPSRILEMVDVAEKITADKGIAREPVGQAQWTVAAGAVALGLIPVVGSMLSNI HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAGAIKSQIEKAIKK HHHHHHHHHHHHHCC >Mature Secondary Structure TEMKTVTTYGAILGAVLGQIRSAAGMKQSDLAEAVGVGPSTWSRIEKGESSLSTDQLKL CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCHHCCHHHHHH AADALKVPPSRILEMVDVAEKITADKGIAREPVGQAQWTVAAGAVALGLIPVVGSMLSNI HHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAGAIKSQIEKAIKK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA